Corynebacterium urealyticum DSM 7109: cu0684
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Entry
cu0684 CDS
T00685
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cur
Corynebacterium urealyticum DSM 7109
Pathway
cur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
cu0684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cur03019
]
cu0684
03009 Ribosome biogenesis [BR:
cur03009
]
cu0684
Enzymes [BR:
cur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
cu0684
Messenger RNA biogenesis [BR:
cur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
cu0684
Ribosome biogenesis [BR:
cur03009
]
Prokaryotic type
rRNA helicases
cu0684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
adh_short
Motif
Other DBs
NCBI-ProteinID:
CAQ04644
UniProt:
B1VFV5
LinkDB
All DBs
Position
815515..817851
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AA seq
778 aa
AA seq
DB search
MSDTDSVSGDVNKPVDNDYSVAQNNLQEEKQQAPANDAPLNISDVLGENTEDSAMESAGD
SAVAEGAEDSGKTDNLNNEKNKNENPEDTVADQQAETVENNNTDDTTPTASSQDDVVAQD
NEQENKDDDGAGFGDLGLSPEVFDAVRAVGFTKPSPIQEQTIPLLMAGEDVVGLAQTGTG
KTAAFALPILSRLNLKSRKPQALVLAPTRELALQVAESFEDFAEKMGGVNILPIYGGQPY
GAQLSGLRRGAHVVVGTPGRVIDHLQKGSLDISELRFMVLDEADEMLNMGFQEDVERILE
DTPEDKQVALFSATMPSAIRHLSKRYLNSPQEVTVKSTQRTAENIEQDYLIVHHREKLDA
LTRILEVTDFDAMIMFVRTKNDTEELAERLRARGYEAAAINGDIAQAQRERTVDQLKDGR
LDILVATDVAARGLDVERITHVFNYDIPRDTESYVHRIGRTGRAGRSGRAVLFVTPRERR
MLKSIERATKSRLNEIELPSVDQVNEARKAKFNRELTKNLEDPQVSVFRDLVTTYAEANG
VTLEDIAAALAAGAQGGEKFLMEEAPRREHKRRSDDRYGDADRRGGGAYRSFEERFNKPA
PRFTDRNGNEMEVYRLSVGHRQRVRPGAIVGALANEGGLNSRDFGRISIFSEHSLVELPA
DLPKQVFEALDQTRVSGQLINIEPDPGAPKGRPGSHRGNRRDRDDRRGGYREDRGRGDRR
GGGRFDRDRDRGGRGRGRGHHNRFEDSRGDRRGGGRQRDDRGFEGRGGRGNNRRGGRY
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatactgatagcgtctccggcgacgtcaacaagccggtggataacgattactcg
gtagctcagaacaatctgcaggaagagaagcagcaggcgccggccaacgacgcgccgctg
aatatctctgatgtgttgggggagaacaccgaagattccgcgatggaatccgccggtgac
tccgctgtagccgagggcgcagaagattctgggaagaccgacaatctcaacaacgagaag
aacaagaacgagaacccagaggacactgtggccgatcagcaggcggaaaccgtagaaaac
aacaacaccgacgacaccaccccgaccgcgtccagccaggacgacgtcgtcgcgcaggac
aacgagcaggaaaacaaggacgacgacggcgccggtttcggcgacctcggtctgtcgccg
gaggttttcgacgctgtccgtgccgtcggtttcaccaagccctccccgatccaggaacag
accatcccgctgctgatggcaggggaggacgtggtcggtcttgcgcagaccggtaccggt
aagaccgccgccttcgcgctgccgatcctgtcccgactgaacctgaagtcccgcaagccg
caggccctggtgctcgcgccgacccgtgagctggccctgcaggttgctgagtccttcgag
gacttcgcggagaagatgggcggggtcaacatcctgccgatctacggcggccagccctat
ggtgcgcagctttccggcctgcgccgtggcgcgcacgtggtcgtcggcaccccgggtcgc
gtgatcgaccacctgcagaagggcagcctcgatatctccgagctgcgcttcatggtgctc
gacgaggccgacgagatgctgaacatgggcttccaggaggacgtggaacgcatcctcgag
gacaccccggaggataagcaggtcgcactgttctcggcgacgatgccgtccgcgatccgc
cacctgtccaagcgctacctcaactcgccgcaggaagtgacggtcaagtccacccagcgc
accgcggagaacatcgagcaggactatctgatcgtgcaccaccgcgagaagctcgacgct
ctgacccgcatcctcgaggtcaccgacttcgatgcgatgatcatgttcgtccgcaccaag
aacgacaccgaggaactcgcggagcgcctgcgcgcccggggctacgaggctgccgccatc
aacggcgatattgcccaggcacagcgcgagcgcaccgtcgaccagctcaaggacggtcgc
ctggacatcctggttgccaccgacgtcgccgcccgtggccttgacgtcgagcgcatcacg
cacgtgttcaactacgacatcccgcgcgacaccgagtcctatgtccaccgcatcggccgc
accggacgtgcggggcgttccggtcgcgccgtgctgttcgtgaccccgcgcgagcgccgg
atgctgaagtccatcgagcgcgcgacgaagtcccgcctcaacgagatcgagctgccgagc
gttgaccaggtcaacgaggcccgcaaggcgaagttcaaccgcgagctgaccaagaatctc
gaggatccgcaggtctccgtgttccgcgacctggtgaccacctacgcggaagccaacggg
gtcaccctggaagacatcgccgcggcacttgcggccggtgcccagggtggggagaagttt
ctcatggaggaggcgccgcgccgagaacacaagcggcgcagcgatgaccgctacggcgat
gctgatcgtcgtggtggcggcgcctaccgctccttcgaggagcgcttcaacaagccagca
ccgcggttcacggaccgcaacggcaacgagatggaggtctaccggctttccgtcggccac
cgccagcgcgtgcgcccgggcgcgatcgtgggtgccctggccaacgagggcggcctgaac
tcccgcgatttcggccgcatcagcatcttctctgagcactccctggtggagctgccggcg
gacctgccgaagcaggtctttgaggctctcgaccagacccgcgtgtccggccagctgatc
aatatcgagccggatccgggcgctccgaagggccgaccgggctctcaccgtggcaaccgt
cgcgaccgcgatgaccggcgcggtggttaccgcgaagaccggggccggggcgaccgccgg
ggcggcggtcgttttgaccgggaccgcgaccgaggtggccgcgggcgtggccgtgggcac
cacaaccgctttgaggactcccgtggggatcgccgtggcggtggacgccagcgggatgac
cgcggtttcgagggccgtggcggtcgcggtaataaccgtcgcgggggacgctactag
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