Corynebacterium urealyticum DSM 7109: cu1186
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Entry
cu1186 CDS
T00685
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cur
Corynebacterium urealyticum DSM 7109
Pathway
cur03030
DNA replication
cur03430
Mismatch repair
cur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
cu1186
03430 Mismatch repair
cu1186
03440 Homologous recombination
cu1186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cur03032
]
cu1186
03400 DNA repair and recombination proteins [BR:
cur03400
]
cu1186
Enzymes [BR:
cur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
cu1186
DNA replication proteins [BR:
cur03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
cu1186
DNA repair and recombination proteins [BR:
cur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
cu1186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CAQ05146
UniProt:
B1VHA5
LinkDB
All DBs
Position
complement(1397433..1400999)
Genome browser
AA seq
1188 aa
AA seq
DB search
MSRSSFVHLHNHTEYSMLDGMAKVDMLAEEVSRQGMPAVGMTDHGNMFGADAFYRTMTAA
GIKPIIGIEAYMAPDSRFNMNRVRWGNPEQKKDDVSASGAYLHQTMLAENATGLRNLFYL
SSMASYEGQLGKWPRMDAELIAEHAEGVIATTGCPSGDVQTRLRLGQFNEALEAAAMWQD
IYGKDNFFLELMDHGLEIEKRVRDELMEIGRKLDLPPLVTNDCHYVLENQAAAHEVMLCV
QTGSTMDEPTIDEGGKRFAFSGSSYYIRTAEDIRNQWDHVVPDGCDNTLWIAERVQDYGE
IWEEHPYDRMPVAEVPEGHTPTSWLTHEVNRGLEERFNGGPVPQEYLDRAEYEISVIDMK
GYPSYFLIVAELIKYARSVGIRVGPGRGSAAGALVAYALTITNIDPIEHGLLFERFLNPE
RPSAPDIDIDFDDRRRGEMIRYASDRWGEDKIAQVITFGTVKTKQAIKDSARAWYGQAGF
QMADRITKALPPAIMAKDIELKGIKDPEHPRYAEAAEVRQLIDTDPQVNKIYEDALGLEG
VVRQAGVHACAVIMSSVPLLDCIPMWKRKQDGALITGWPYPACEAIGLLKMDFLGLRNLT
VIGDAIDNIKKNRGEDFDLEGLATEDAATYELLARGDTLGVFQLDSGGMQELLKRMQPTG
FNDIVAALALYRPGPMGVKAHWEYADRKNGRKPITPIHPELEEPLKEILEETYGLIVYQE
QIMRISQKVANYTAGQADGFRKAMGKKKREVLDQEYETFSGGMIDNGYSKDAIDTLWNTI
LPFADYAFNKSHAAGYGLVSFWTAYLKANYTAEYMAALLTSVSNQKDKSAIYLSDCRHLG
IKVLSPDVNESAFTFQSVGEDIRFGLGAVRNVGEDVVESIIASREEKGDFKDFSDYLDKI
DAVAASKRVTESLIKAGAFDSLGHPRKGLVLVHEDAVDAVVATKKAAAKGQFDLFAGLGA
EEAGDVFKVEVPDQEWERKHELALERDMLGLYVSGHPLDGFEDALDAQIDTPLPTVLSGE
LPNNKDVKIGGIISSVERRVDRNGAPWVIATLEDQHGAQVELLVFAKTYQMVAPQIVEDN
IVLAKAKIRYRDDRMSIFCEDLKSAELSIGAGTGVPLRLNIRVDQATPENMQRLKQVLSN
NKGDSDVYLTLIDGEQEVQFLLGPEMRVTKSPALMGDLKASTWEGIFA
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctcgtctttcgtccacctgcataatcacacggaatactccatgctcgacggc
atggcgaaggtagacatgctcgccgaggaggtctcccgccaggggatgcccgcggtcggc
atgaccgaccacggcaacatgttcggcgcggatgccttctaccgcaccatgacggcggcc
gggatcaagccgatcatcggcatcgaggcctatatggcccccgactcccgcttcaatatg
aaccgcgtgcgctggggtaacccggagcagaagaaggacgacgtctcggcctccggcgcg
tacctgcaccagaccatgctcgccgagaacgccaccggcctgcgcaacctcttctacctc
tcctcgatggcctcctacgagggccagctgggtaagtggccccgcatggacgccgagctc
atcgccgagcatgccgagggcgtcatcgcgaccaccggctgcccctccggggacgtgcaa
acccgcctccgccttggccagttcaacgaggccctcgaggccgcggcgatgtggcaggac
atctacggcaaggacaacttcttcctcgagttgatggatcacgggctggagatcgagaag
cgcgtccgcgacgagctcatggagatcggccgcaagctggacctgccgccgctggtgacc
aacgactgccactacgtgctggagaaccaggccgctgcacacgaggtcatgctctgtgtg
cagaccggctccaccatggacgagcccaccatcgacgagggcggtaagcgtttcgccttc
agcggctcctcctactacatccgcactgcggaggacatccgcaaccagtgggaccacgtc
gtcccggatggctgcgataacaccttgtggatcgccgaacgcgtccaggactacggcgag
atctgggaagagcacccctacgaccgcatgccggtcgcagaggttccggaaggccacacg
ccgacgtcctggttgacccacgaggtcaaccgcggcctggaggagcggttcaacggtggc
ccggtgccgcaggaatacctcgaccgcgctgagtacgagatcagcgtcatcgacatgaag
ggctacccttcctacttcctcatcgtcgccgagctgatcaagtacgcccgctccgtcggc
atccgcgtcggccccggccgtggctccgccgcaggcgccctggtggcctacgctctgacg
attacgaacatcgaccccatcgagcatggcctgctcttcgagcgcttcctcaacccggag
cgtccgtccgcacccgatatcgatatcgacttcgacgaccgccgccgtggcgagatgatc
cgctatgcctccgaccgctggggcgaggacaagatcgcccaggtcatcaccttcggcacg
gtgaagaccaagcaggcgattaaggactccgcacgagcttggtacggccaggccggtttc
cagatggccgaccggatcaccaaggccctgccgccagcgatcatggccaaggacatcgag
ctcaagggcatcaaggacccggagcacccgcgctacgcggaggccgccgaggttcgccag
ctcatcgacaccgacccgcaggtcaacaagatctacgaggacgccctcggcctggagggg
gttgtgcgccaggcgggtgtgcacgcctgtgccgtcattatgtccagcgtgccgctgctg
gactgcatcccgatgtggaagcgcaagcaggacggcgcgctcatcaccggctggccctac
ccggcctgtgaggccatcggcctgctgaagatggacttcctggggctgcgcaacctcacc
gtcatcggtgacgcgatcgacaacatcaagaagaaccggggcgaggacttcgacctggaa
ggcctggccaccgaggatgcggccacctatgagttgctggcgcgcggcgacaccctgggc
gtgttccagctggactccggcggcatgcaggagctgctgaagcgcatgcagcccaccggc
ttcaacgacatcgtcgccgcactcgcgctctaccgcccgggcccgatgggcgtgaaggcc
cactgggagtacgcggaccgcaagaacgggcgcaagccgatcaccccgatccacccggag
ctggaggagccgctcaaggagatcctggaggagacctacggcctcatcgtgtaccaggag
cagatcatgaggatctcgcagaaggtcgcgaactacaccgccggtcaggcagatggtttc
cgtaaggccatgggtaagaagaagcgcgaggtcctggaccaggagtacgagaccttctcc
ggcggcatgatcgacaatggctactccaaggacgccatcgacacgctgtggaacacgatc
ctcccgttcgcggactacgctttcaataagtcccacgccgcaggctacgggctggtctcc
ttctggacggcctacctcaaagccaactacaccgccgagtacatggcagccctgctgacc
tcggtgtccaaccagaaggacaagtccgcgatctacctctccgactgccgccacctgggc
atcaaggtgctgtccccggacgtcaacgagtccgccttcaccttccagtccgtgggtgag
gacatccgcttcggcctgggcgcggtccgcaacgtcggcgaggacgtcgtcgaatccatc
atcgccagccgggaggagaagggtgacttcaaggacttctccgactacctggacaagatc
gacgccgtcgccgcctccaagcgggtgaccgagtcgctcatcaaggcgggcgccttcgac
tccctggggcacccgcgcaagggcctcgtccttgtccacgaggacgccgtcgacgccgtc
gtcgcgacgaagaaggccgccgctaaggggcagttcgacctcttcgccggcctcggtgcc
gaggaggccggggacgtcttcaaggtcgaggtcccggaccaggagtgggagcgcaagcac
gagctcgctctggagcgcgacatgctgggcctgtacgtttccggccaccccctcgacggt
ttcgaggatgcactcgacgcccagatcgacactccgctgcccactgtcctgtccggcgag
ctgccgaataacaaggacgtcaagatcggcggcatcatctccagcgtcgagcggcgcgtg
gaccgcaatggtgcgccctgggtcatcgccaccctcgaggatcagcacggcgcgcaggtg
gaactgctcgtcttcgcgaagacttaccagatggtcgccccgcagattgtggaggacaac
attgtcctggccaaggccaagatccgctaccgcgacgaccgcatgagcatcttctgcgaa
gatctgaagtccgctgagctctccatcggggcgggaaccggcgtgccactgcggctgaac
atccgcgtcgaccaggccaccccggagaacatgcagcgcctcaagcaggtgctgagcaac
aacaagggtgactcggatgtttacctcaccctcatcgatggcgagcaggaggtgcagttc
ctgctcgggccagagatgcgggtgaccaagtccccggcactgatgggggacctgaaggcc
agcacctgggagggtatcttcgcctaa
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integrated database retrieval system
