Corynebacterium urealyticum DSM 7109: cu1369
Help
Entry
cu1369 CDS
T00685
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
cur
Corynebacterium urealyticum DSM 7109
Pathway
cur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
cu1369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cur03019
]
cu1369
03009 Ribosome biogenesis [BR:
cur03009
]
cu1369
Enzymes [BR:
cur01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
cu1369
Messenger RNA biogenesis [BR:
cur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
cu1369
Ribosome biogenesis [BR:
cur03009
]
Prokaryotic type
rRNA processing factors
cu1369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
S1
HC2
Motif
Other DBs
NCBI-ProteinID:
CAQ05329
UniProt:
B1VGM2
LinkDB
All DBs
Position
complement(1615174..1618746)
Genome browser
AA seq
1190 aa
AA seq
DB search
MAFTPEPALIESAGKINTESFGRRVRVHSVAKELGITSKEFIAVLGEFGIAGKVPSSTLS
NEEATDVVSRLAAGGGVTQSEQPAAKREADAAEPAADKVEAKKRTAKKAGAKKSAAKKAT
PKKTTAKKSTKKTAAKEAAPTQETPEQDTSPEAAEQQEEQKKAEPKKGARKSTQKSAEKS
AQQAEKKGAAKKSSTKRAATKKAEAKKAEVDNAQPRQAAAEQPAQAESPAGTTPESQTST
DEATPQPTRRRVRRIVRRVGSRAIQQDSAAAKTELSDEGSKKQEPSKNSEAKKAEPKKKE
QKAQQPNPEPQGATEEAITADQLHPGEREEADIVDEPVRLKGSTRLESKRRWREENRERG
RHKAISRSEFLARRESVHRQMMVRDAERHDHTGLTTQVGVVEDGQLVEHFVTSDTQQSMV
GNIYLGRVQNVLASMEAAFIDIGTGRNAVLYASEVNWHSPHLHSKSRRIDQALRSGDQVM
VQVIKDPVGHKGARLTNRISFAGRYLVYFPGGTTAGISRKLPEAERKRLKEILQRVVPGQ
GGAIIRTAAENVAEELIEEDVNRLHKQWLNIEKTEAKERKSKGAKPVTLYEEPNMLITVI
RDLFNEDFSELLVEGDKSWRMVRDYMGRMAPELMDRVHKWHPEQHADEDVFAAHRLDDQL
AKALCRKVWLPSGGHLVIDHTEAMTVIDVNTGSFVGSGGNLEETVTENNLEAAEEIVRQM
RLRDIGGMIVVDFIDMVLEENQDLVLRRLIEYLGRDRTHHKVSEVTSLGLVQITRKRLGA
GLLETFSTTCECCDGRGVIVHPDPVEQDFSEEPERRRRSSRGNGRGRDERGSKEQRNGQG
TEQRQGGRGDQGSKNHGRDEQRDQRGKNATRHEDKGSKSKVANGKGREDAQDHRNSEGQE
RRSGKQRQDSQAGSESAADLGGEQKQETRTSRRGGRRSVQRRTSSSVKDATARTEQGSAE
KKQSADRSDEASQSGQERAPRRVVRRIVRRTAPSQQRGGAAQRRSAANADAPELKISSRE
DRGSDQRGEQQKSESGSRGARRRGRRVVRSRPAVRQSDTRQAGGDTLRGEESSGQQRSGQ
KQGSAGDRRSSATRRSGTRGAGKYGATTYEEAVKEFENSPRRRRRTRGNSVSDRRPQPED
FGAQPEANQAKEEPKRESRNAGKTEQPAQSESRGRTRDRRRRVVRSNPRR
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
gtggcttttacgccggaaccagcgctgattgaatcggccggaaaaattaatactgaaagc
ttcggtcgcagggtgcgcgtgcactcggtggccaaggagctggggatcaccagcaaggag
ttcatcgccgtgctgggggagttcgggatcgctggcaaggttccttcctcgacgctgtcg
aacgaggaggccaccgatgtggtctctcgcctggctgccgggggaggggtaacccagtct
gagcagccagcggcgaagcgcgaggctgacgcagcggagcccgctgccgacaaggtcgag
gccaagaagcgtactgccaagaaggcgggggccaagaagagcgccgctaagaaggcaacg
cctaagaagacgactgctaagaagagcacgaagaagactgctgcgaaggaggctgcgccc
acgcaggagactccggagcaagacacctctccagaggctgctgaacagcaggaagagcag
aagaaggcagagcctaagaagggtgctcgcaagagcacccaaaagagcgccgaaaagagt
gcacagcaggctgagaagaagggcgctgcgaagaagtcgagcaccaagcgtgccgccacc
aagaaggcggaagcgaagaaggccgaggtagacaacgcgcagccgcgccaggccgcagcg
gagcaaccagctcaggccgagtcgccggcaggcaccaccccggagagccagacttctacg
gacgaggcgactccgcagcccactcgccgccgtgtgcgccgaatcgtgcgccgcgtgggc
agccgagccatccagcaggactcggcagcggcgaagacggagctttcggacgaggggtcc
aagaagcaggaaccctcgaagaattccgaggccaagaaggcggagcccaagaagaaggaa
cagaaggcccagcagcccaacccggagccgcagggcgcaaccgaggaggccatcaccgcc
gaccagctgcacccgggtgagcgcgaagaggcggacatcgtcgacgagccggtgcgcctg
aagggctccacccgcctggaatccaagcgccgctggcgggaggagaaccgcgagcgcggc
cgccacaaggccatcagccgctccgagttcctcgcgcgccgggagtccgtgcaccgccag
atgatggtgcgcgacgccgagcgccacgaccacaccggcctgacgacccaggtgggcgtc
gttgaggatggccagctggtcgagcacttcgtcaccagcgacacccagcagtcgatggtc
ggcaatatttacctgggccgggtgcagaatgtcctggcttccatggaggcggcattcatt
gacatcggcaccggccgcaacgcggtgctctacgccagcgaggtcaactggcattccccg
cacctgcactccaagtcccgccgcattgaccaggcgctgcgctctggcgaccaggtcatg
gtccaggtcattaaggacccggtcggccacaagggtgcccgcctgaccaatcgcatcagc
ttcgcaggtcgctacctcgtgtacttcccgggcggtaccaccgcaggcatttcccgcaag
ctgccggaggccgagcgcaagcggctgaaggagatcctgcagcgcgtcgtgccgggccag
ggcggggcgatcatccgcaccgccgcggaaaacgtagccgaggagctcatcgaggaggac
gtcaaccgcctccacaagcagtggctgaacatcgagaagaccgaggccaaggagcgcaag
tccaagggcgcgaagccggtgacgctctacgaagagccgaacatgctgatcacggtcatc
cgcgacctgttcaacgaggacttctccgagctgctcgtcgagggcgataagtcctggcgc
atggtccgcgattacatgggtcgcatggccccggagctgatggatcgggtgcacaagtgg
caccccgagcagcacgccgacgaggacgttttcgccgcgcaccgtctcgacgaccagctc
gccaaggcgttgtgcaggaaggtctggctgccctccggtggccacctggtcatcgaccac
accgaggcgatgaccgtcatcgacgtcaacaccggctccttcgtgggctccggcggcaac
ctcgaggaaacagtcaccgagaataacctcgaggccgccgaggagatcgtgcgccagatg
cggctgcgcgatatcggcggcatgatcgtcgtcgactttatcgacatggtgctggaggag
aaccaggacctggtgctgcgccgcctcatcgagtacttgggccgcgaccgcacccaccac
aaggtcagcgaggtcacctcgctgggcctggtgcagatcacccgcaagcgcctgggtgct
ggcctgctggagaccttctccaccacctgtgagtgctgcgacggccgcggcgtgatcgtg
catcccgacccggtcgagcaggactttagcgaggagccagagcgtcgccgtcgttcctcc
cgtggcaatggccgcggccgtgacgagcgtggcagcaaggagcagcgcaacggtcagggc
acggagcagcgtcagggcggacgcggagaccaggggtccaagaaccacggccgtgacgag
cagcgtgaccagcgcggcaagaacgcgacgcgccacgaggacaagggctccaagtccaag
gtcgccaatggcaaggggcgcgaggatgctcaggaccaccgcaactccgaggggcaggaa
cgccgctccggcaagcagcgccaggattcgcaggcaggttctgagtccgcggcagatctc
ggcggggagcagaagcaggagacgaggacgtcgcgccggggcggtcgccgttccgttcag
cgccgcaccagctcttctgtgaaggacgccaccgcccgcaccgagcaggggtccgcggag
aagaagcaatctgccgaccgatcggatgaggcatcccagtccggccaggagcgcgctcct
cgccgggtggttcgccgcattgtgcggcgcacggcacctagccagcagcggggtggcgcc
gcccagcgacgctctgcggcgaatgcggatgccccggagctgaagatttcttctcgcgag
gaccgcggttctgatcagcggggtgagcagcagaagtccgagagcggctcccgtggggcg
cgtcgccgtggccgtcgcgtggtccgctcgaggccggccgttcgacagtccgacacgcga
caggcaggcggggacaccctgcgcggtgaggagtcgagcgggcagcagcgttccgggcag
aagcaaggttcggcgggcgatcgccgatccagcgcaacgcggcgctctggaactcggggt
gcggggaagtacggtgccaccacctatgaggaggcggtcaaggagttcgagaactcgcca
cgccgtcgccgccgcactcgcggcaattccgtgtcggaccgccgtccgcagccggaggac
ttcggcgctcagcccgaggccaaccaggccaaggaggagccgaagcgggagagccggaac
gccgggaagaccgagcaaccggcgcagagtgagtctcgaggccgcacgcgcgatcgtcgt
cgccgggttgtgcgcagcaatccgcggcgctag
DBGET
integrated database retrieval system
