Curtobacterium sp. 458: QPJ90_16990
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Entry
QPJ90_16990 CDS
T11715
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
curb Curtobacterium sp. 458
Pathway
curb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
curb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QPJ90_16990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
curb03019
]
QPJ90_16990
03016 Transfer RNA biogenesis [BR:
curb03016
]
QPJ90_16990
Enzymes [BR:
curb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QPJ90_16990
Messenger RNA biogenesis [BR:
curb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QPJ90_16990
Transfer RNA biogenesis [BR:
curb03016
]
Prokaryotic type
tRNA degradation factors
QPJ90_16990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_KhpA-B
KH_PNO1_2nd
KH_NusA_1st
Motif
Other DBs
NCBI-ProteinID:
WJX99966
LinkDB
All DBs
Position
complement(3529578..3531851)
Genome browser
AA seq
757 aa
AA seq
DB search
MEGPEIKFAEAVIDNGKFGKRVVRFETGRLAQQAQGAVAAYLDEETMLLSATSAGKHPRE
GFDFFPLTVDVEERSYAAGKIPGSFFRREGRPSTEAILVCRLIDRPLRPSFVDGLRNEVQ
IVITVLSIAPDEFYDALAINAASASTQISGLPFSGPIAGVRLALIGDQWVAFPKASQLAE
AVFDLTVAGRVVTDEAGNEDVAIMMVEAEATEHSWDLIQGGATKPDEAIVAQGLEAAKPF
LKVLVEAQAKMAAQSAKEIQDYPVFPPYAPEVYDAVEALALDELKDVYQIAGKLERQDKD
DALKARVKEAIAAKVEAGELPESANGQVSGAYKSVTKKVVRGRILTEQVRMDGRGLADIR
PLDAEVAVIPRVHGSAIFQRGETQILGVTTLNMLKMEQQIDSLSPVTKKRYLHHYNFPPY
STGETGRVGSPKRREIGHGFLAERALVPVLPSREEFPYAIRQVSEALGSNGSTSMGSVCA
STLSLLNAGVPLKAPVAGIAMGLVSDTVDGQTRYAALTDILGAEDALGDMDFKVAGTSDF
VTAIQLDTKLDGIPSSVLDAALKQAKEARSAILGVLNEAIDAPDEMADTAPRVISVQIPV
DKIGELIGPKGKTINGIQDETGADISIEDDGTVYIGAVDGPSAEAARAQVNAIANPTNPE
IGDQFLGTVVKIATFGAFVSLLPGRDGLLHVSEVRKLAGGKRVENVEDVLGVGQKILVEV
TKVDDRGKLSLAPVIADDVDTEGGKGHETHAEAPAEG
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
ttggagggtcccgagatcaagttcgccgaagccgtcatcgacaacggcaagttcggcaag
cgcgtcgtccggttcgagaccggccgcctcgcacagcaggcgcagggcgcggtcgccgcg
tacctcgacgaggagaccatgctcctctcggccaccagcgccggcaagcacccgcgggag
ggcttcgacttcttcccgctgaccgtcgacgtcgaggagcgctcgtacgccgcgggcaag
atccccggctcgttcttccgtcgtgagggtcgcccctcgaccgaggcgatcctcgtctgc
cgcctcatcgaccggccgctgcgcccgtcgttcgtcgacggcctccgcaacgaggtccag
atcgtcatcaccgtcctgagcatcgcgccggacgagttctacgacgcgctcgcgatcaac
gcggcgtccgcgtcgacgcagatctccggtctgccgttctccggcccgatcgccggtgtg
cgcctcgcgctcatcggtgaccagtgggtcgcgttcccgaaggcgtcgcagctcgccgag
gccgtcttcgacctcaccgtcgcgggccgtgtcgtcacggacgaggccggcaacgaggac
gtcgcgatcatgatggtcgaggccgaggccaccgagcacagctgggacctcatccagggc
ggcgcgaccaagcccgacgaggcgatcgtcgcgcagggcctcgaggcggcgaagccgttc
ctcaaggtcctcgtcgaggcgcaggcgaagatggccgcgcagtcggccaaggagatccag
gactacccggtcttcccgccctacgcccccgaggtctacgacgcggtcgaggcgctcgcc
ctcgacgagctcaaggacgtctaccagatcgccggcaagctcgagcgtcaggacaaggac
gacgccctcaaggcccgcgtcaaggaggccatcgcggccaaggtcgaggccggggagctc
cccgagagcgccaacggccaggtcagcggcgcctacaagtcggtcacgaagaaggtcgtc
cgcggccgcatcctgaccgagcaggtccgcatggacggtcgcggcctcgccgacatccgt
ccgctcgacgccgaggtcgccgtgatcccgcgcgtccacggctcggcgatcttccagcgt
ggcgagacgcagatcctcggcgtcaccacgctgaacatgctcaagatggagcagcagatc
gactcgctgtcgcccgtcacgaagaagcgctacctgcaccactacaacttcccgccctac
tcgaccggtgagaccggccgtgtgggttcgccgaagcgtcgcgagatcgggcacggcttc
ctcgccgagcgcgcgctcgtgccggtgctgccgtcgcgcgaggagttcccctacgccatc
cgtcaggtgtccgaggccctcggctcgaacggttcgacgtcgatgggttccgtctgcgcc
tcgaccctgtcgctcctcaacgccggtgtgccgctcaaggccccggtcgcgggcatcgcg
atgggcctcgtctccgacaccgtcgacggccagacccgctacgcggcgctgaccgacatc
ctcggtgccgaggacgccctcggtgacatggacttcaaggtcgccggcacgtcggacttc
gtcacggcgatccagctcgacacgaagctcgacggcatcccctcgtcggtcctcgacgcc
gcgctcaagcaggccaaggaagcgcgctccgcgatcctcggtgtgctgaacgaggccatc
gacgcccccgacgagatggccgacaccgcgccgcgcgtcatctcggtgcagatccccgtc
gacaagatcggcgagctgatcggcccgaagggcaagacgatcaacgggatccaagacgag
accggcgccgacatctcgatcgaggacgacggcaccgtgtacatcggcgccgtcgacggt
ccgtcggccgaggccgcccgcgcccaggtcaacgcgatcgcgaacccgacgaacccggag
atcggggaccagttcctcggcacggtcgtcaagatcgcgacgttcggtgccttcgtgtcg
ctgctcccgggccgcgacggtctgctccacgtctccgaggtccgcaagctcgccggtggc
aagcgtgtggagaacgtcgaggacgtgctcggcgtcggccagaagatcctggtcgaggtc
accaaggtggacgaccgcggcaagctgtcgctcgcgccggtcatcgccgacgacgtggac
accgagggcggcaagggtcacgagacccacgccgaggctccggccgagggctga
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