Campylobacter ureolyticus: CUREO_0345
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Entry
CUREO_0345 CDS
T04021
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cure
Campylobacter ureolyticus
Pathway
cure03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cure00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CUREO_0345 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cure03019
]
CUREO_0345 (pnp)
03016 Transfer RNA biogenesis [BR:
cure03016
]
CUREO_0345 (pnp)
Enzymes [BR:
cure01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CUREO_0345 (pnp)
Messenger RNA biogenesis [BR:
cure03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CUREO_0345 (pnp)
Transfer RNA biogenesis [BR:
cure03016
]
Prokaryotic type
tRNA degradation factors
CUREO_0345 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_2
HI0933_like_1st
KH_KhpA-B
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AKT90225
UniProt:
A0AAU8UAD0
LinkDB
All DBs
Position
359310..361472
Genome browser
AA seq
720 aa
AA seq
DB search
MRYRVDINNNLEIYDVDKVAKQASGAVLLQIKNAVVLATVAREDEKVEGDFLPLTVSYIE
KQYAAGKIPGGYIKRETKPGDFETLTSRIIDRSLRPLFPKGYAYPTQIVVFVLSADSEVD
LQVMALNAASMALYLSDIPVDAPVCGVRVAMIDNEFVLNPTNKELDKSVLDLYVAGVKDE
LLMIEMRSIPQKNDKKEISNDPLDALNFTPNQNMNEFDEELMVKAIDFAGKAILNGSQIY
EDTFKDARKTKLDLELNPEMEDEEIAKFIDENYKDEVRFAINQMAKSERATELNKIVKKI
SNGEMALNLDWKEEVISTVLNKYKRKIVRSQIINENVRADGRGLKEIRPISIETNILPSA
HGSCLFTRGQTQALVVATLGSENDAQISDVLTQSEPLSERFMVNYNFPGFSVGEASPLKS
PGRRELGHGNLAKRALAPSVDLENAEVIRLVSEILESNGSSSMATVCGGSLALRAAGVNT
YKLVAGIAMGLIFEDGKHAILSDIMGLEDHDGDMDFKVAGSLDGITALQMDIKLGGISLD
VLKEALYQAKEGREHILNLMNEADLKIKVNDEILPKTEIFNIDPSKMVDVIGQGGKTIKS
LVDDYLVTIDLDRDSGEVKILGKNKNLVYEAKEKILEIVKKDNKFKGPKKDHKKNIKFEI
GEEFEGEVKSVMPFGVFISLRDGVDGLLHISNIKDELKEGDIVKVAVDGQKGNKISLKLV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgcgttatagagtagatataaataacaatttagaaatttatgatgttgataaggttgca
aaacaagcttcaggggctgttttattacaaattaaaaatgcagttgttttagcaactgtt
gcaagagaagatgaaaaagtagaaggagattttttacctttaactgtttcatatatagaa
aaacaatacgcagcaggaaaaattcctggtggttatattaaaagagagactaaaccaggg
gattttgaaacacttacttcaaggataattgatagaagtttaagaccactttttccaaaa
ggatatgcttatcctacccaaatagttgtttttgttttatcagctgatagcgaagttgat
ttacaagttatggcactaaatgcagcaagtatggcactgtatctaagtgatattcctgta
gatgcaccagtttgtggtgttagagttgccatgatagataatgagtttgttttaaaccct
acaaataaagaacttgataagagtgtcttggatctttatgttgcaggtgttaaagatgag
cttttaatgatagaaatgcgctcaatcccgcaaaaaaatgataaaaaagaaatttccaac
gatccacttgatgctttaaattttactccaaatcagaatatgaatgaatttgatgaagaa
ttgatggtaaaggctatagattttgctggaaaagctatattaaatggaagtcaaatttat
gaagatacctttaaagatgctagaaaaactaaattggatttagagttaaatccagaaatg
gaagatgaggagatagctaaatttattgatgaaaattataaagatgaggttagattcgct
ataaaccaaatggcaaaaagcgaaagagcaaccgagcttaacaaaatagtcaaaaaaata
tcaaatggtgaaatggcactaaatttggactggaaagaagaagttatttcaactgtttta
aataaatacaaaagaaaaatagtaagaagtcaaattataaatgaaaatgttagggctgat
ggaagaggcttaaaagaaattagaccaataagcattgaaacaaacattcttccaagcgct
catggaagttgtctttttacaagaggtcaaacacaagccttggtagttgcgacacttggc
agtgaaaatgatgctcaaataagtgatgttttaactcaaagtgaaccgctaagcgagaga
tttatggtaaattataatttcccaggatttagtgtcggcgaagcaagtcctttaaaaagt
cctggaagaagagaacttggccatggaaatttagctaaaagagctttagctccaagtgtt
gatttagaaaatgcagaagtcataaggctggttagtgaaattcttgaaagtaatggatct
agctctatggcaacagtttgtgggggatctttagccctaagagcggctggagtaaatacc
tataagttagttgcaggaattgcaatgggacttatattcgaagatggaaaacatgctatt
ttaagcgatattatgggacttgaagatcatgatggagatatggattttaaagttgctggc
tcacttgatggtataactgctcttcaaatggatataaagcttggcggaattagccttgat
gttttaaaagaagctctttatcaggcaaaagaaggaagagaacatatattaaatttaatg
aatgaagctgatcttaaaataaaggtaaatgatgaaattttgcctaaaactgaaattttt
aatatcgatccaagcaaaatggtagatgtcatcggacaaggcggaaaaacaataaaaagc
ttagttgatgattatttagttacaattgatcttgatagagatagcggcgaagtgaaaatt
cttggtaaaaataaaaatttagtttatgaagcaaaggaaaagattcttgaaattgtaaaa
aaagataataaatttaaaggcccaaaaaaagatcataaaaaaaatatcaaatttgaaata
ggtgaagaatttgaaggtgaggttaaaagcgttatgccttttggagtatttattagttta
agagatggggttgatggattgcttcacatatcaaatataaaagatgaattaaaagagggc
gatatagtaaaagttgcagtagatgggcaaaaaggtaacaaaatatctttaaagcttgtt
taa
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