Curtobacterium sp. TXMA1: LCG91_03400
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Entry
LCG91_03400 CDS
T10647
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
curt Curtobacterium sp. TXMA1
Pathway
curt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
curt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LCG91_03400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
curt03019
]
LCG91_03400
03009 Ribosome biogenesis [BR:
curt03009
]
LCG91_03400
Enzymes [BR:
curt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LCG91_03400
Messenger RNA biogenesis [BR:
curt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LCG91_03400
Ribosome biogenesis [BR:
curt03009
]
Prokaryotic type
rRNA helicases
LCG91_03400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
HEM4
adh_short
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
UBQ03229
LinkDB
All DBs
Position
689509..691371
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AA seq
620 aa
AA seq
DB search
MSTDTATTTETTDEGPVVTFADLGLSDPVLKAVKDIGYETPSAIQEATIPTLLEGRDVVG
LAQTGTGKTAAFALPILSRMESGSKVPQALVLSPTRELALQVCEAFEQFASHMKHVHVLP
VYGGQAYGVQLSALRRGVDVVVGTPGRIMDHIAKGTLDLSELKYLVLDEADEMLKMGFAE
DVETILAETPDDKQVALFSATMPAQIRRISQQYLTDPSEITVKTKTKTAANITQRYLMVS
YPQKVDALTRILEVEDFEGMIIFVRTKSETETLAEKLRARGYAAAAISGDVAQAQRERTV
NQLKSGKLDILVATDVAARGLDVDRITHVVNFDIPVDIESYVHRIGRTGRAGRKGDSISF
VTPRERRLLSAIERHTKQPLTQMQLPTIEDVNETRLSRFDDAITAALEQQDRIEKFRDVI
AHYVRNHDVPAEDVSAALAVVAQGDSPLLLDPNEDQLRNQVDRDGRRGERRDRDDDRGGR
EDRGPRRSQPMTAYRIEVGRRHRVEPRQIVGALANEGGLRRDDFGAIQIRPDFSIVELPE
SMDPGVLDRLSDTRISGKLIEIKPDRRGGARRYDRDDRGPRGPRRDDRGPRRDDDRPRRD
DRRDDRPRYDDDRPARKPRH
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggacaccgccaccaccaccgagaccaccgacgaggggcccgtggtgaccttc
gccgacctcggcctgagcgacccggtgctcaaggccgtcaaggacatcggctacgagacc
ccctccgccatccaggaagcgacgatcccgacgctgctcgaggggcgcgacgtcgtcggc
ctcgcgcagaccggtaccggcaagaccgcggcgttcgcgctgccgatcctgtcccgcatg
gagtcgggcagcaaggtgccgcaggcgctcgtgctgtcgcccacccgcgagctcgcgctg
caggtgtgcgaggcgttcgagcagttcgcgtcgcacatgaagcacgtgcacgtcctgccc
gtctacggcggccaggcgtacggcgtccagctgtccgcgctgcgccgcggcgtcgacgtc
gtcgtcggcacgcccggtcgcatcatggaccacatcgccaagggcacgctcgacctgtcc
gagctgaagtacctcgtgctcgacgaggccgacgagatgctcaagatgggcttcgccgag
gacgtcgagacgatcctcgccgagacgcccgacgacaagcaggtcgcactgttctcggcg
acgatgcccgcgcagatccgtcgcatctcgcagcagtacctgaccgacccgtccgagatc
acggtcaagaccaagacgaagaccgctgcgaacatcacgcagcggtacctgatggtgtcg
tacccgcagaaggtcgacgcgctcacccgcatcctcgaggtcgaggacttcgagggcatg
atcatcttcgtccgcaccaagagcgagaccgagaccctggccgagaagctgcgtgcccgc
gggtacgcagccgcggccatcagcggtgacgtcgcccaggcgcagcgcgagcgcacggtc
aaccagctcaagtccggcaagctcgacatcctcgtcgccaccgacgtcgccgctcgtggt
ctcgacgtcgaccgcatcacccacgtcgtgaacttcgacatccccgtcgacatcgagtcc
tacgtccaccgcatcggccgcaccggtcgcgcgggtcgcaagggcgactcgatcagcttc
gtcaccccgcgcgagcgccggctgctctcggccatcgagcgccacaccaagcagccgctc
acgcagatgcagctcccgacgatcgaggacgtcaacgagacgcgcctgagccgcttcgac
gacgcgatcaccgcggcgctcgagcagcaggaccgcatcgagaagttccgcgacgtcatc
gcgcactacgtccgcaaccacgacgtcccggcagaggacgtctcggctgcgctcgcggtg
gtggcacagggcgactcgccgctgctgctcgacccgaacgaggaccagctccgcaaccag
gtcgaccgcgacggtcgtcgtggtgagcgccgtgaccgggacgacgaccgtggtggccgc
gaggaccgcgggccgcgccgttcgcagccgatgaccgcgtaccgcatcgaggtcggtcga
cggcaccgggtcgagccgcgccagatcgtcggcgcgctcgcgaacgagggcggactgcgc
cgcgacgacttcggcgcgatccagatccgaccggacttctcgatcgtcgagctgcccgag
agcatggaccccggcgtgctcgaccgtctgtcggacacccggatcagcgggaagctcatc
gagatcaagccggaccgccgcggtggtgcccgccggtacgaccgcgacgaccgtggtccg
cgtggccctcgtcgagacgaccgtggtccgcgtcgcgacgacgaccgtccgcgccgtgac
gaccggcgcgacgaccgtcctcgctacgacgacgaccgcccggcgcgcaagccgcgccac
tga
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