Curtobacterium sp. TXMA1: LCG91_03755
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Entry
LCG91_03755 CDS
T10647
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
curt Curtobacterium sp. TXMA1
Pathway
curt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
curt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LCG91_03755 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
curt03400
]
LCG91_03755 (mfd)
Enzymes [BR:
curt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LCG91_03755 (mfd)
DNA repair and recombination proteins [BR:
curt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
LCG91_03755 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
UvrB_inter
Helicase_C
TRCF
CarD_TRCF_RID
ResIII
Cas3-like_C_2
RecG_dom3_C
DUF3638
Motif
Other DBs
NCBI-ProteinID:
UBQ03298
LinkDB
All DBs
Position
772927..776538
Genome browser
AA seq
1203 aa
AA seq
DB search
MTISGIIPALSRASAFDRVLRAAGRDADFSVVDGLRVPLLGALLAERNGPQCLFVVTATG
REAEAVRGAFTCTVPDAEVLEFPAWETLPHERLSPSAQTVGTRIATLRKLAAWQDADAAD
RRTTVVVASVRAALQPIAGNLTSLAPVALVTGSRGNDLAAIASQLVDLAYARVDLVTRRG
EFAVRGGILDVFPPGADHPVRVDFFGDEIEAIKAFSVADQRTTDDDLGSVELTASRELLL
SDDVRQRAREMLHEFPNLSQMLAKIAEGIPVEGMESLAPALVQDLVPITSYLPEAATIAV
LSPERVAGRAHSLAETNTEFLQAAWSAAVAGAQAPIDLDAGNFLTVQQLKNGRGQRTWWT
VTPFDSGLDEGDRERVLTDAEAAAEAGEYIRVRAESIPSFTGSADGAVAHVGQLVADGWA
VVVTAQGKGLVERAVQVLADAGVAARADDLTAPPEPGMTIVTTATVEAGFAIADPRIAVL
SEAEFYGRSVQQGARTVKKLAGRRKNVVDPLQLKPGDVVVHNTHGIGKFVELVSREVSSG
GRNAVKTQREYLVLEYAPSKRNYPGDKLFVPTDQLDQLSRYVGGENPTLSKMGGSDWSAA
KSKARKAVRDIAVDLVKLYSARMASKGHAFGPDTPWQRELEEAFPFAETADQLTTIDEIK
RDMESPIPMDRLLSGDVGYGKTEVAIRAAFKAVQDGKQVAVLVPTTLLVRQHMETFQERF
AGFPVHLRALSRFQTEKESKETIAGLADGTVDIVIGTHRILSQNIQFKDVGLVIIDEEQR
FGVEHKDQLKKLKTNVDVLAMSATPIPRSLEMAVTGIREMSTLATPPEDRHPILTFVGPQ
SDLQVAAAIRRELLREGQVFYVHNRVKDIQSVASHLAEIVPEARIQVAHGQMSEGTLEQV
MVDFWERKFDVLVSTTIVETGLDIANANTLIIDKADKYGLSQLHQLRGRVGRGRERGYAY
FLYDADKPLSETAQDRLETIAANNELGAGMQVAMKDLEIRGAGNLLGGEQSGHIAGVGFD
LYLRMIGEAVSQFRGDVAEGQTELRLEIPVDAHIPEDYVESERLRLEAYQKLSAASAPAA
QPEAIDMVLDELTDRYGQPPQPVLTLVEVSRLRRMAQQVGLSDVVVMGSNLRIAGKELAD
SAQVRLKRMFPGARWFPQQDAASIPLPKPHGETLPDDGLIQWVESILTAVYGASKAPAET
PAG
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
gtgacgatctcgggcatcatccctgcgctctcgcgcgcctccgcgttcgatcgcgtcctc
cgcgctgccgggcgtgacgcggacttctccgtcgtcgacggcctgcgcgtcccgctgctc
ggtgccctgctcgccgagcgcaacggtccccagtgcctcttcgtcgtcaccgccaccggg
cgcgaggccgaggcggtccgcggtgccttcacctgcaccgtccccgacgccgaggtgctc
gagttccccgcgtgggagaccctgccgcacgagcgtctgagcccgagtgcccagacggtc
ggcacccgcatcgcgacgctccggaagctcgcggcgtggcaggacgccgacgcggccgac
cgccgcacgaccgtcgtcgtggcgagcgtccgcgccgcgctgcagccgatcgcggggaac
ctgacctcgctcgcgccggtcgcactggtcaccggctcgcgcggcaacgacctcgcggcg
atcgcgtcgcagctcgtcgacctggcgtacgcccgggtcgacctcgtcacccgccgcggc
gagttcgcggtgcgcggtggcatcctcgacgtcttcccgccgggggccgaccacccggtg
cgcgtcgacttcttcggcgacgagatcgaggcgatcaaggccttctcggtcgccgaccag
cgcaccaccgacgacgacctcggctcggtcgagctgacggcctcgcgcgaactcctgctg
agcgacgacgtgcggcagcgtgcgcgcgagatgctgcacgagttcccgaacctgtcgcag
atgctcgcgaagatcgccgagggcatcccggtcgagggcatggagtccctcgcgccggcc
ctcgtgcaggacctcgtcccgatcacgagctacctgcccgaggccgcgacgatcgccgtg
ctctccccggagcgggtcgccggccgcgcgcacagcctggccgagacgaacaccgagttc
ctgcaggcggcctggagcgctgcggtcgccggggcacaggcgccgatcgacctcgacgcc
ggcaacttcctcaccgtgcagcagctgaagaacggtcgtgggcagcgcacctggtggacc
gtcacgccgttcgactccggactcgacgagggcgaccgcgagcgcgtcctcaccgacgcc
gaggcggccgccgaggccggcgagtacatccgcgtccgggccgagtcgatcccgagcttc
acgggcagcgccgacggcgccgtggcgcacgtcgggcagctcgtggccgacggctgggcc
gtggtcgtcaccgcgcagggcaagggcctcgtcgagcgcgcggtccaggtcctcgccgac
gcgggggtcgccgctcgggccgacgacctcaccgccccgccggagccggggatgacgatc
gtcacgaccgccaccgtcgaggccggcttcgcgatcgccgacccgcggatcgccgtcctg
agcgaggccgagttctacggccgcagcgtgcagcagggcgcacgcaccgtgaagaagctc
gccgggcgccgcaagaacgtcgtcgacccgctgcagctcaagccgggcgacgtcgtcgtg
cacaacacccacggcatcggcaagttcgtcgagctcgtctcgcgcgaggtcagctccggc
ggtcgcaacgccgtgaagacgcagcgcgagtacctcgtgctcgagtacgccccgtcgaag
cggaactacccgggcgacaagctcttcgtgcccaccgaccagctcgaccagctgtcccgc
tacgtcggcggcgagaacccgacgctgtcgaagatgggcggctcggactggtccgcggcg
aagtcgaaggcccgcaaggccgtccgcgacatcgccgtcgacctggtgaagctgtactcg
gcgcgcatggcgtcgaaggggcacgcgttcggcccggacaccccgtggcagcgtgagctg
gaagaggccttcccgttcgcggagaccgccgaccagctcaccaccatcgacgagatcaag
cgcgacatggagagcccgatcccgatggaccggctgctctccggcgacgtcggctacggc
aagaccgaggtggcgatccgcgcggcgttcaaggccgtccaggacggcaagcaggtcgcc
gtgctcgtcccgacgacactgctcgtgcgccagcacatggagacgttccaggagcgcttc
gccggcttccccgtgcacctgcgcgccctgagccggttccagaccgagaaggagtcgaag
gagaccatcgccggcctcgccgacggcacggtcgacatcgtcatcgggacgcaccgcatc
ctgtcgcagaacatccagttcaaggacgtcgggctcgtcatcatcgacgaggagcagcgc
ttcggcgtcgagcacaaggaccagctcaagaagctcaagacgaacgtcgacgtcctggcg
atgtccgcgacgccgatcccgcgctccctcgagatggcggtcacgggcatccgcgagatg
tccacgctcgcgaccccgccggaggaccgccacccgatcctgacgttcgtcgggccgcag
tccgacctgcaggtcgccgccgcgatccggcgtgagctcctgcgcgagggccaggtgttc
tacgtgcacaaccgcgtgaaggacatccagtcggtggcgtcgcacctcgccgagatcgtg
cccgaggcccggatccaggtcgcgcacgggcagatgtccgagggcaccctcgagcaggtc
atggtcgacttctgggagcgcaagttcgacgtgctcgtctcgacgaccatcgtcgagacc
ggcctcgacatcgcgaacgcgaacacgctcatcatcgacaaggccgacaagtacggactg
tcgcagctccaccagctgcgcggccgtgtcggtcgtggtcgggagcgcgggtacgcgtac
ttcctctacgacgccgacaagccgctctccgagaccgcgcaggaccgcctcgagaccatc
gccgcgaacaacgagctcggcgccggcatgcaggtcgcgatgaaggacctcgagatccgc
ggcgccggcaacctgctcggtggcgagcagtccggccacatcgccggtgtcgggttcgac
ctgtacctgcgcatgatcggcgaggccgtgtcccagttccgcggtgacgtggccgagggg
cagacggagctccggctcgagatcccggtcgacgcgcacatcccggaggactacgtcgag
tccgagcggctccgactcgaggcgtaccagaagctctcggcggcctcggccccggcggcg
cagcccgaggcgatcgacatggtgctcgacgagctgaccgaccgctacggccagcccccg
cagccggtgctcaccctggtcgaggtctcgcgcctccgccgcatggcccagcaggtcggt
ctgtccgacgtcgtcgtgatgggctcgaacctgcggatcgcgggcaaggagctcgccgac
tcggcccaggtccggctgaagcgcatgttccccggcgcgcgctggttcccccagcaggat
gccgcgagcatcccgctgccgaagccgcacggcgagacgctgcccgacgacgggctcatc
cagtgggtggagagcatcctgacggcggtctacggggcctcgaaggcgcctgcggagacg
cccgcgggctga
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integrated database retrieval system
