Curtobacterium sp. TXMA1: LCG91_05605
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Entry
LCG91_05605 CDS
T10647
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
curt Curtobacterium sp. TXMA1
Pathway
curt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
curt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LCG91_05605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
curt03019
]
LCG91_05605
03400 DNA repair and recombination proteins [BR:
curt03400
]
LCG91_05605
Enzymes [BR:
curt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LCG91_05605
Messenger RNA biogenesis [BR:
curt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LCG91_05605
DNA repair and recombination proteins [BR:
curt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LCG91_05605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
HEM4
Pribosyltran
KORA
Motif
Other DBs
NCBI-ProteinID:
UBQ03637
LinkDB
All DBs
Position
complement(1181243..1183411)
Genome browser
AA seq
722 aa
AA seq
DB search
MSGLGVGSSVGSPAPAAAPPSAEIAAEAQAALAALTGRPDAVFHPGQLEAISALVEHRQR
ALVVQRTGWGKSAVYFLATLLLRRRGGGPTVLVSPLLALMRDQVAAAARAGVRAVSINSA
NAHEWADTQAALARDEVDVLLVSPERLNNPRFRDEQLPTLIARMGMLVVDEAHCISDWGH
DFRPDYRRLAELIRSLPQGVPVLATTATANERVVKDVAEQLTAGPDAPVFTIRGSLARAS
LRLGVLTLPDARQRLGWLLAHLGDLPGSGIIYTLTVSGAEDIARLLRENGYAVRAYTGRT
DTEEREQLEQQLKGNELKALVATSALGMGFDKPDLGFVVHVGAPSSPVAYYQQIGRAGRA
TDNADVLLLPGREDREIWQYFASASMPTEARASAVLGALSTDSAMSTVALEGLVDIKRST
LELLLKVLDVDGAVRRVAGGWVSTGQPWQYDAARYERVAAAREAEAASMLAYESTSACRM
QLLQQDLDDPSAEPCGRCDNCAGVWYPTSVSDSDASGAAAALDKVGVEIAPRAQWPSGMS
ALGVPVKGKIPAGELVEPGRAVARLTDLGWGGPLRALFSTTTPDGPVSRELVDGCIRALK
DWPWAERPTGVVAMSSRSRPELVGSLAQALASIGRLQFLGTLGRSGGEPRGDGATNSAYR
LSGVWDTFVVDPALATALESQQGPVLLVDDLVDSRWTMTVAGRELRRAGVSAVLPFALAT
VA
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtctcggtgtcggttcgtccgtcggctcgcctgcccccgcggcggctccgccg
tccgccgagatcgctgcggaggcacaggcggccctggccgccctgaccggccgtccagac
gcggtcttccaccccggccagctcgaggcgatctcggccctcgtcgagcaccggcagcgc
gccctcgtggtgcagcgcaccgggtggggcaagtcggccgtgtacttcctcgcgaccctg
ctgctgcgccgtcgcgggggcggcccgaccgtgctcgtgtcgcccttgctcgccctgatg
cgcgaccaggtcgccgcggctgcacgggccggggtccgcgcggtgtcgatcaactcggcg
aacgcgcacgagtgggcggacacgcaggcggccctggcgcgggacgaggtcgacgtgctc
ctcgtctcccccgagcgcctcaacaacccgcggttccgcgacgagcagctgccgacgctg
atcgcccggatgggcatgctcgtggtggacgaggcacactgcatctccgactgggggcac
gacttccgcccggactaccgacggctcgccgagctcatccgctcgctcccccagggcgtc
cccgtgctcgcgacgaccgcgaccgcgaacgagcgcgtggtgaaggacgtcgccgagcag
ctcaccgccggcccggacgccccggtcttcaccatccgcgggtccctggcgcgggcgtcg
ctccggctcggtgtcctgaccctgccggacgcccggcagcgcctcggctggttgctcgcc
cacctgggcgacctgcccggcagcggcatcatctacacgctgaccgtgtccggggccgag
gacatcgcccgactcctgcgcgagaacgggtacgccgtgcgcgcctacaccgggcggacc
gacaccgaggagcgcgagcagctcgagcagcagctcaagggcaacgaactcaaggcgctc
gtggcgacgagcgcgctcggaatggggttcgacaagccggacctcgggttcgtcgtgcac
gtcggtgccccctcgtcgcccgtcgcctactaccagcagatcggccgcgccgggcgtgcg
accgacaacgccgacgtcctgctgctgcccgggcgcgaggaccgcgagatctggcagtac
ttcgcgagcgcgtcgatgccgaccgaggcccgcgcctccgccgtgctcggtgcgctctcc
accgactccgcgatgtccaccgtggcactcgaggggctcgtcgacatcaagcgctcgacc
ctcgagctgctgctcaaggtgctcgacgtcgacggcgccgtccgtcgggtcgccggcggc
tgggtgtcgaccgggcagccgtggcagtacgacgccgcgcggtacgagcgggtcgccgcg
gcgcgcgaggccgaggccgcgtcgatgctcgcctacgagtccacctcggcgtgccgcatg
cagctgctgcagcaggacctcgacgacccgtccgcggagccctgcgggcgctgcgacaac
tgcgcgggcgtctggtacccgacgtcggtgtcggactcggacgcctcgggtgccgccgcc
gcgctcgacaaggtgggcgtcgagatcgccccacgcgcacagtggccgtccggcatgagc
gcgctcggtgtgcccgtgaaggggaagatcccggccggggagctcgtcgagccgggtcgg
gccgtcgcccgactcaccgacctcggctggggtgggccgctccgcgcgctcttctcgacc
acgacgccggacggccccgtctcacgcgaactggtcgacgggtgcatccgtgctttgaag
gactggccctgggccgagcgtccgaccggggtcgtggcgatgtcgtcgcggtcgcgaccg
gagctcgtcggctcgttggcacaggcgctggcgtcgatcgggcggctgcagttcctcggg
acgctcgggcggagcggcggggagcctcgcggggacggtgcgacgaacagcgcctaccgg
ctgtcaggggtgtgggacaccttcgtggtggatccggcgctcgctacggcgctggagtcg
cagcagggcccggtgctgctcgtggacgacctggtggacagccggtggacgatgaccgtc
gccggacgggagctccggcgtgcgggggtttcggccgtgctgccgttcgcgctcgcgacg
gtggcctga
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