Curtobacterium sp. TXMA1: LCG91_15205
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Entry
LCG91_15205 CDS
T10647
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
curt Curtobacterium sp. TXMA1
Pathway
curt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
curt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LCG91_15205 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
curt03021
]
LCG91_15205 (rpoC)
03400 DNA repair and recombination proteins [BR:
curt03400
]
LCG91_15205 (rpoC)
Enzymes [BR:
curt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LCG91_15205 (rpoC)
Transcription machinery [BR:
curt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LCG91_15205 (rpoC)
DNA repair and recombination proteins [BR:
curt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LCG91_15205 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
UBQ02378
LinkDB
All DBs
Position
complement(3217068..3220949)
Genome browser
AA seq
1293 aa
AA seq
DB search
MLEATSFDAIRIGLATAEDIRQWSYGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWEC
ACGKYKRVRFKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDM
APKDLEKVIYFAAYMIIDIDEEGRHADMPGLENEMRLEIKNLEGQRDSIIADRLKKLEDD
LAALEEEGAKADVKRRTKDTAEKEMSQVRKSFDEDITRLERVWEDFRNLKVGDLKPEDAV
FHELQDRFGIYFDAYMGAEAIKLRLEAFDLAAEAESLRLQIAEGKGQKKIRAIKRLRVVS
SFLATGNSPAAMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHQCGLPKQMALELFKPFVIKRLIDLSHAQNIKSAKRMVERSR
PQVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQ
MAVHLPLSVEAQAEARILMLASNNILKPSDGRPVTLPAQDMIIGLHHLTTVREGALGEGR
AFSSVAEAILAKDQNTLHLNAMVKIRMSGVHFAEGEAPEGYEVGQPILLETTLGRALFNE
TLPADYPFVQRVTDKGTLSAIVNDLAERYSKTETAAALDRIKDAGFYWGTRSGVTVALSD
VVTPPRKKEIIAGYEVQAAKVQGEFDKGLITDAERRADLIKIWTEATNEIAQEMRDNFPI
DNTINRMVSSGARGNWLQVRNIAGMRGLVNNPKGEIIARPIINSYREGLTVAEYFIATHG
ARKGLADTALRTADSGYLTRRLVDVSQDVIIREDDCGTTRGLELPIATKGEDGKLVRDPR
VENTVYSRTLAVEAVDANGTVVAEAGSDVGDVLLDTLLEAGVESIKVRSVLTCESAVGVC
AKCYGRSLATGNLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGSASADDITQGLPRVTE
LFEARTPKGASPIAEAPGRVTIEDTDKGRRIILTPDNGDEPFIYPVLKRATLLIEDGQHV
ELGEQFIAGTVDPKEVLRVKGVREVQKHLVNGVQDVYGSQGVPIHDKHIEVIVRQMLRKV
TVVDHGDTDLLPGELVDRSRYNALNRAALQEGRKTASARQEVMGITKASLATESWLSAAS
FQETTRVLTQAAMEGKQDHLVGLKENVIIGKLIPAGTGLSRYRDVDVAATEEAKAERYPN
RIFADDSSFSDADLSFVDFDSFSSDDFTPGTYN
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgaagcaacgtcatttgacgccatccggatcggcctcgcgaccgccgaggacatc
cgtcagtggtcgtacggcgaggtcaagaagccggagaccatcaactaccgcaccctgaag
cccgagaaggacggtctgttcggcgagcagatcttcggtccgtcccgtgactgggagtgc
gcctgcggcaagtacaagcgtgtccgcttcaagggcatcgtctgcgagcgctgcggcgtc
gaggtcaccaagtcctcggtccgccgtgagcgcatgggccacatcgagctcgccgcaccc
gtcacgcacatctggtacttcaagggtgtcccgtcgcgcctcgggtacctcctcgacatg
gcgccgaaggacctcgagaaggtcatctacttcgcggcgtacatgatcatcgacatcgat
gaagagggccgtcacgccgacatgcccggtctcgagaacgagatgcgcctcgagatcaag
aacctcgagggtcagcgcgactcgatcatcgccgaccgcctcaagaagctcgaggacgac
ctcgcagcgctcgaggaagagggcgccaaggccgacgtgaagcgccggaccaaggacacc
gccgagaaggagatgtcccaggtccgcaagtccttcgacgaggacatcacccgcctcgag
cgcgtgtgggaggacttccgcaacctcaaggtcggcgacctcaagcccgaggacgccgtg
ttccacgagctgcaggaccgcttcgggatctacttcgacgcctacatgggcgccgaggcg
atcaagctgcggctcgaggcgttcgacctggccgccgaggccgagtcgctgcgcctgcag
atcgccgagggcaagggccagaagaagatccgcgcgatcaagcgtctgcgcgtcgtcagc
tccttcctcgccaccggcaactcgccggccgcgatggtgctcgacgtcgtgccggtcatc
ccgccggagctccgcccgatggtgcagctcgacggtggccgcttcgccacgtcggacctc
aacgacctctaccgtcgtgtgatcaaccgcaacaaccgtctccgccgcctgctcgacctc
ggtgcccccgagatcatcgtgaacaacgagaagcgcatgctgcaggaggccgtcgacgcg
ctgttcgacaacggtcgtcgtggtcgtccggtcacgggtaccggcaaccgcgccctgaag
tccctgagcgacatgctcaagggcaagcagggtcgtttccgccagaacctgctcggcaag
cgcgtcgactactcgggtcgttcggtcatcatcgtcggcccgcagctcaagctgcaccag
tgcggtctgccgaagcagatggcgctcgagctgttcaagccgttcgtcatcaagcgcctc
atcgacctgtcgcacgcgcagaacatcaagtcggccaagcgcatggtcgagcgttcgcgt
ccgcaggtgtgggacgtgctcgaggagatcatccgcgagcgccccgtcctgctgaaccgt
gcgccgacgctgcaccgcctgggcatccaggcgttcgagccgcagctcgtcgagggcaag
gccatccagctccacccgctcgtgtgtgctgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctgtcggtcgaggcccaggccgaggcccgcatcctgatgctc
gcctcgaacaacatcctcaagccgtcggacggccgtccggtgaccctgcccgcacaggac
atgatcatcggtctgcaccacctgacgaccgtccgcgagggcgcgctcggcgagggccgt
gcgttctcgtcggtcgccgaggcgatcctggccaaggaccagaacacgctgcacctcaac
gcgatggtgaagatccgcatgtcgggtgtgcacttcgccgagggcgaggcgccggagggc
tacgaggtcggtcagccgatcctcctcgagaccaccctgggccgtgcgctcttcaacgag
acgctgccggcggactacccgttcgtccagcgcgtcaccgacaagggcaccctctccgcg
atcgtcaacgacctcgccgagcgctactccaagaccgagacggccgccgcgctggaccgg
atcaaggacgcgggcttctactggggcacgcgctccggtgtgaccgtggcgctgtcggac
gtcgtgacgcctcctcgcaagaaggagatcatcgcgggctacgaggtccaggccgccaag
gtccagggcgagttcgacaagggtctgatcaccgacgcggagcgccgcgccgacctgatc
aagatctggaccgaggccacgaacgagatcgcgcaggagatgcgcgacaacttcccgatc
gacaacaccatcaaccgcatggtctcgtcgggtgctcgtggtaactggctgcaggtgcgc
aacatcgccggtatgcgtggtctggtgaacaacccgaagggtgagatcatcgcccgcccg
atcatcaactcgtaccgcgagggcctgaccgtggcggagtacttcatcgccacgcacggt
gcccgcaagggtctggcggacacggctctccggaccgccgactcgggctacctgacccgg
cgtctcgtggacgtttcgcaggacgtcatcatccgtgaggacgactgcgggacgacccgt
ggcctcgagctgccgatcgcgaccaagggcgaggacggcaagctcgtccgcgacccgcgc
gtcgagaacacggtgtactcgcgcaccctggccgtcgaggccgtggacgcgaacggcacc
gtggtcgccgaggccggctcggacgtcggtgacgtcctgctggacacgctgctcgaggcg
ggtgtcgagagcatcaaggtgcgctcggtcctgacctgcgagtccgccgtcggcgtctgc
gcgaagtgctacggccgttcgctcgccacgggcaacctcgtcgacatcggcgaggcggtc
ggcatcatcgccgcccagtccatcggtgagcccggtacccagctgacgatgcgtaccttc
cacacgggtggttcggcctcggccgacgacatcacgcagggtctgccccgcgtgaccgag
ctcttcgaggcccgcaccccgaagggcgcgtccccgatcgccgaggcccccggccgcgtc
acgatcgaggacacggacaagggtcgtcggatcatcctcacgccggacaacggcgacgag
ccgttcatctacccggtgctcaagcgtgcgaccctcctcatcgaggacggccagcacgtc
gagctcggcgagcagttcatcgccggcacggtggacccgaaggaggtcctccgggtcaag
ggtgtgcgcgaggtccagaagcacctcgtcaacggtgtgcaggacgtgtacggctcgcag
ggcgtgccgatccacgacaagcacatcgaggtcatcgtccgccagatgctccgcaaggtc
accgtcgtcgaccacggcgacaccgacctgctgccgggtgagctcgtcgaccggtcgcgc
tacaacgcgctgaaccgtgcggcgctgcaggagggtcgcaagaccgcctcggctcgccag
gaggtcatgggcatcacgaaggcgtccctcgcgaccgagtcgtggctgtccgccgcgtcc
ttccaggagaccacccgcgtcctcacgcaggcggccatggagggcaagcaggaccacctc
gtcggcctcaaggagaacgtcatcatcggtaagctcatccccgccgggacgggcctcagc
cggtaccgtgacgtggacgtcgccgcgaccgaggaagccaaggcggagcggtaccccaac
cgcatcttcgccgacgactcctcgttctcggacgccgacctgagcttcgtcgacttcgac
agcttctcgtcggacgacttcacccctgggacctacaactga
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integrated database retrieval system
