Curtobacterium sp. C1: LQK89_05745
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Entry
LQK89_05745 CDS
T10648
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
curz Curtobacterium sp. C1
Pathway
curz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
curz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LQK89_05745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
curz03019
]
LQK89_05745
03400 DNA repair and recombination proteins [BR:
curz03400
]
LQK89_05745
Enzymes [BR:
curz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LQK89_05745
Messenger RNA biogenesis [BR:
curz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LQK89_05745
DNA repair and recombination proteins [BR:
curz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LQK89_05745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
HEM4
KORA
Motif
Other DBs
NCBI-ProteinID:
UFU15197
LinkDB
All DBs
Position
complement(1174914..1177046)
Genome browser
AA seq
710 aa
AA seq
DB search
MDTTTAQPSAAIAAEAQEALAALTGRPDAVFHPGQLEAISALVEHRQRALVVQRTGWGKS
AVYFLATLLLRRRGGGPTVLVSPLLALMRDQVAAAARAGVRAVSINSANAHEWADTQAAL
ARDEVDVLLVSPERLNNPRFRDEQLPTLVARMGMLVVDEAHCISDWGHDFRPDYRRLAEL
IRSLPHGVPVLATTATANERVVEDVAEQLTAGPADPVFTIRGSLARASLRLGVLTLPDAR
QRLGWLLAHLAELPGSGIVYTLTVSGAEDIARLLRENGYAVRAYTGRTDNEEREQLEQQL
KANELKALVATSALGMGFDKPDLGFVVHIGAPSSPVAYYQQIGRAGRATDNADVLLLPGR
EDQEIWQYFASASMPTESRAAAVLGALSTDTAMSTVALEGLVDIKRSTLELLLKVLDVDG
AVRRVAGGWVSTGQPWQYDAARYERVAAARAAEASSMLAYESTTACRMQLLQQDLDDPSA
EPCGRCDNCAGVWYPTAVSDSDTSGAAAALDRVGVEVAPRAQWPSGMSALGVPVKGRIPA
GELVEPGRAIARLTDLGWGGPLRTLFASSTPDGPVSKALVDGCVRALKDWPWAERPTGVV
AMSSRSRPELVASLAQALSTIGRLRFLGTLGRSGGEPRGDGATNSAYRLSGVWDTFVVDP
ELAAALQAHEGPVLLVDDLVDSRWTVTVAGRELRRAGADAVLPFALATVA
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggacacgaccaccgcgcagccgtccgccgcgatcgccgccgaggcgcaggaggccctc
gccgccctgaccggccggccggacgcggtcttccaccccggtcagctcgaggcgatctcg
gccctcgtcgagcaccggcagcgtgcgctcgtcgtgcagcgcaccgggtggggcaagtcc
gccgtgtacttcctcgcaacgctgctgctccggcggcggggcggtgggccgaccgtgctc
gtctcccctctcctggcgctcatgcgggaccaggtcgccgcggccgcccgggccggggtg
cgcgccgtgtcgatcaactccgcgaacgcgcacgagtgggcggacacgcaggctgccctc
gcccgggacgaggtcgacgtgctgctcgtgtcgccggagcggctcaacaacccccggttc
cgcgacgagcagctcccgacgctcgtggcgcggatggggatgctcgtggtggacgaggca
cactgcatctcggactggggccacgacttccggccggactaccgacggctcgcggagctc
atccgctccctgccgcacggggtccccgtcctcgccaccaccgccaccgcgaacgagcgc
gtggtcgaggacgtcgccgagcagctcaccgcgggccccgccgacccggtgttcaccatc
cgcgggtcgctcgcccgtgcgtcgctccggctcggggtcctgacgcttccggacgcccga
cagcggctcgggtggttgctggcgcacctcgccgagctgcccgggagcgggatcgtctac
acgctcacggtctccggggccgaggacatcgcgcggctcctgcgcgagaacgggtacgcc
gtccgtgcgtacacggggcgcaccgacaacgaggagcgcgagcagctcgagcagcagctc
aaggccaacgagctcaaggccctcgtcgcgaccagcgcgctcgggatgggcttcgacaag
ccggacctcgggttcgtcgtgcacatcggggcgccgtcctcccccgtggcgtactaccag
cagatcggtcgcgctggacgtgcgaccgacaacgccgacgtcctgctcctgcccgggcgc
gaggaccaggagatctggcagtacttcgccagcgcctccatgccgaccgagtcccgcgcc
gccgcggtgctcggcgccctgtccaccgacaccgcgatgtccaccgtcgcgctcgagggg
ctggtcgacatcaagcggtcgacgctcgaactcctgctcaaggtgctcgatgtcgacggg
gccgtgcgccgcgtcgccgggggctgggtgtccaccggccagccgtggcagtacgacgcc
gcccggtacgagcgcgtcgctgccgcccgcgcggcggaggcgtcctcgatgctcgcgtac
gagtcgaccacggcgtgccggatgcagctgctgcagcaggacctcgacgacccgtcggcc
gagccgtgcggtcggtgcgacaactgcgcgggcgtctggtacccgaccgcggtctcggac
tccgacacctccggtgctgccgccgccctcgaccgggtcggggtcgaggtcgcaccgcgc
gcccagtggccgtcgggcatgtcggcgctcggcgtcccggtgaaggggcggatcccggcc
ggcgagctcgtggagccgggtcgggcgatcgcccggctgacggacctcgggtggggcggc
cccctgcgcacgctcttcgcgtcgtcgacaccggacggacccgtgtcgaaggcgctcgtc
gacgggtgcgtccgggcgctcaaggactggccgtgggccgagcggccgaccggtgtggtc
gcgatgtcgtcgcggtcgcggccggagctcgtggcctcgctcgcgcaggcgctgtcgacg
atcggtcgcctgcggttcctcggcacgctcgggcggagcgggggcgagccgcgcggggac
ggtgcgacgaacagcgcgtaccggttgtccggggtctgggacacgttcgtggtcgacccc
gagctcgcggcggcgctgcaggcgcacgaggggccggtgctgctcgtggacgacctggtg
gacagccggtggacggtgacggtcgcggggcgggagctccggcgggcgggggcggacgcc
gtactgccgttcgcgctcgccacggtcgcctga
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