Curtobacterium sp. C1: LQK89_08970
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Entry
LQK89_08970 CDS
T10648
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
curz Curtobacterium sp. C1
Pathway
curz03030
DNA replication
curz03410
Base excision repair
curz03420
Nucleotide excision repair
curz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
curz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LQK89_08970 (polA)
03410 Base excision repair
LQK89_08970 (polA)
03420 Nucleotide excision repair
LQK89_08970 (polA)
03440 Homologous recombination
LQK89_08970 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
curz03032
]
LQK89_08970 (polA)
03400 DNA repair and recombination proteins [BR:
curz03400
]
LQK89_08970 (polA)
Enzymes [BR:
curz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LQK89_08970 (polA)
DNA replication proteins [BR:
curz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LQK89_08970 (polA)
DNA repair and recombination proteins [BR:
curz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LQK89_08970 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LQK89_08970 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
NYN_YacP
TraI_hel_assoc_N
Motif
Other DBs
NCBI-ProteinID:
UFU12702
LinkDB
All DBs
Position
complement(1848246..1850891)
Genome browser
AA seq
881 aa
AA seq
DB search
MVIDGHSLAFRAFYALPVDSFVNREGQHTNAIHGFISMLLMLLQREKPTHLAVAFDISRF
SFRTREYEDYKGTRSETPAEFKGQIPLLQQALEAMGITTVTKEDYEADDILATLARQGSE
QGYQVYVVSGDRDSIQLVNDDVTLLYPSVRGVSELTRYDRDKVYERYGIEPHQYPDIAAL
VGETSDNLIGIDKVGEKTAVKWITAYGSLDGVLEHADEIKGVVGNNLREQKDRAIRNRKL
NRLVNDVELPVGPGDVALRPLDEQAVRDLFAKLQFRTLLDRVFKVAGTGEPSDAAESTGS
VDSGAPTPPPVKTVIDEELGYWLDRKAANDAENGFGVAVEVIDGRLSAIGIATHDDAVLV
PGGSGTKDYEQLAAWFASDAPKHFHDAKAAIKALATVGFTVRGIAGDARLTGWLAQPGKQ
GQPLSDLVYQELGEELPTADPNQLVPETDPVNVGVHAWYVLRVDTALRARVDESSLRVLD
TIELPLVPVLAGMETTGVAIDRPVLTGLSHDLGERAAELAQQAFAEIGHEVNLGSPKQLQ
EVLFTELAMPKTRKTKTGFSTDAASLADLQEQHPHPFLGLLLQHRDATKLRQIVDTLDAA
VVDGRIHTSYEQTGSSTGRISSTDPNLQNIPVKTAVGRRVRSAFAVAEPYTTLVTADYSQ
IEMRIMAHLSGDPGLIQAFNEGEDLHRFVGARVFGVEPADVSAEMRTKVKAMSYGLAYGL
SPFGLSKQLRIDQSEARTLMNEYFARFGAVRDYLRGVVEQAREDGYTETIFGRRRPFPDL
KSPNRVLRENAERAALNAPIQGSAADIMKIAMLGVDADLRDGGLESHLLLQVHDELILEV
APGEQERVEEILRTRMGGAAELSVPLDVSVGVGPNWEAAAH
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggtcatcgacggccactcgctcgccttccgggccttctacgcgctcccggtcgacagc
ttcgtgaaccgcgaggggcagcacacgaacgccatccacggcttcatctcgatgctgctc
atgctcctccagcgcgagaagcccacgcacctcgccgtcgcgttcgacatctcccgcttc
tcgttccgcacgcgcgagtacgaggactacaagggcacccgctccgagaccccggccgag
ttcaagggccagatcccgctcctgcagcaggcgctcgaggcgatgggcatcacgacggtc
acgaaggaggactacgaggccgacgacatcctcgccacgctcgcccgccagggctcggag
caggggtaccaggtgtacgtcgtgtccggtgaccgcgactcgatccagctcgtgaacgac
gacgtcacgctgctctacccgtccgtccgcggggtctccgagctcacccgctacgaccgc
gacaaggtgtacgagcgctacggcatcgagccgcaccagtacccggacatcgcggcactc
gtcggcgagaccagcgacaacctgatcggcatcgacaaggtcggcgagaagaccgccgtc
aagtggatcaccgcgtacggctcgctcgacggggtgctcgagcacgccgacgagatcaag
ggcgtcgtcggcaacaacctgcgcgagcagaaggaccgggcgatccggaaccggaagctg
aaccggctcgtgaacgacgtcgagctgccggtcggccccggcgacgtggcgctccgtccg
ctcgacgagcaggccgtccgcgacctcttcgcgaagctgcagttccgcacgctgctcgac
cgggtgttcaaggtcgccggcacgggcgagccgtccgacgcagcggagtcgacgggctcc
gtcgacagcggtgcgccgaccccgccgcccgtcaagaccgtcatcgacgaggagctcggg
tactggctcgaccgcaaggccgcgaacgacgccgagaacgggttcggcgtcgcggtcgag
gtcatcgacggccgactgagcgccatcggcatcgcgacgcacgacgacgccgtgctcgtc
cccggcggcagcggtacgaaggactacgagcagctcgcggcctggttcgcgtcggacgcg
cccaagcacttccacgacgccaaggccgcgatcaaggccctcgcgacggtcgggttcacg
gtgcgggggatcgcgggcgacgcgcgcctcaccgggtggctcgcccagccggggaagcag
ggccagccgctgtccgacctcgtgtaccaggagctcggcgaggaactgccgaccgccgac
ccgaaccagctcgtccccgagaccgacccggtgaacgtcggtgtgcacgcctggtacgtc
ctccgtgtcgacaccgccctgcgcgcgcgcgtcgacgagtcctcgctccgcgtgctcgac
accatcgagctgccgctcgtgccggtgctcgccggcatggagaccaccggcgtcgcgatc
gaccgccccgtcctcaccgggctgtcgcacgacctgggtgagcgcgccgcggagctcgcg
cagcaggcgttcgccgagatcgggcacgaggtcaacctcggctcgccgaagcagctgcag
gaggtgctcttcaccgagctcgcgatgccgaagacgcggaagaccaagaccggcttctcg
accgacgccgcgagcctcgccgacctgcaggagcagcacccgcacccgttcctcggactg
ctgctgcagcaccgtgacgcgacgaagctccggcagatcgtggacacgctcgacgccgcg
gtcgtcgacggccgcatccacacgagctacgagcagaccggcagcagcaccggccggatc
tcgtcgaccgacccgaacctgcagaacatccccgtcaagaccgcggtcggacgccgggtc
cgctcggccttcgccgtcgccgagccgtacacgaccctggtcacggccgactactcgcag
atcgagatgcgcatcatggcgcacctgtccggcgaccccgggctcatccaggccttcaac
gagggcgaggacctgcaccgcttcgtcggcgcgcgggtcttcggggtcgagccggcggac
gtcagcgccgagatgcgcacgaaggtcaaggcgatgtcgtacggcctcgcctacggcctg
agcccgttcggcctgtcgaagcagctccgcatcgaccagtccgaggcgcgcacgctcatg
aacgagtacttcgcccgcttcggcgccgtgcgcgactacctgcgcggggtcgtggagcag
gcgcgcgaggacggctacaccgagacgatcttcggccgccgccgacccttccccgacctg
aagagcccgaaccgggtcctccgcgagaacgccgagcgcgccgcgctgaacgcaccgatc
caggggtccgcggcggacatcatgaagatcgcgatgctcggtgtcgacgccgacctgcgg
gacggcgggctcgagtcgcacctgctgctccaggtgcacgacgagctcatcctcgaggtc
gcccccggcgagcaggagcgcgtcgaggagatcctgcgcacccggatgggcggcgcggcc
gagctcagcgtccccctggacgtctccgtcggcgtcggcccgaactgggaggccgcggcg
cactga
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