Curtobacterium sp. C1: LQK89_15665
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Entry
LQK89_15665 CDS
T10648
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
curz Curtobacterium sp. C1
Brite
KEGG Orthology (KO) [BR:
curz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
curz03032
]
LQK89_15665
03400 DNA repair and recombination proteins [BR:
curz03400
]
LQK89_15665
Enzymes [BR:
curz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LQK89_15665
DNA replication proteins [BR:
curz03032
]
Prokaryotic type
DNA Topoisomerases
LQK89_15665
DNA repair and recombination proteins [BR:
curz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LQK89_15665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
THDPS_N_2
Glyco_hydro_19
Motif
Other DBs
NCBI-ProteinID:
UFU13917
LinkDB
All DBs
Position
complement(3257977..3258954)
Genome browser
AA seq
325 aa
AA seq
DB search
MTRLRRSATNGRGYHRVRSGRGFSYRDPDGNTVTDPEVRQRLEDLVIPPAWDDVWISPYE
NGHVLATGIDGAGRRQYMYHPSWRERMDRIKYDRALALAESLPGARRMVTQDLRRPEPDR
RRALAAAFRMLDQGSLRVGSERYATEHGSRGLSTLLCAHAHVSGNDIELDFPGKSGQEWS
STIHDADLARVIAGMKRRGANARLLAFRERRGAEWEPLAAEDINEYVKERAGDAFTAKDF
RTLHGTVAAAVDLAKTGTQPSQAKRKKAVSHAVKAASEELGNTPTVCRQSYIDPRLLDAY
EHGETIDPARLHAAESEVRALLYRQ
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtgacccgtctccgccgatccgcgaccaacggccgcggctaccaccgtgtccgcagcggc
cgcggcttctcgtaccgcgacccggacggcaacaccgtcaccgaccccgaggtgcgccag
cggctcgaggacctcgtgatcccgccggcgtgggacgacgtctggatctcgccgtacgag
aacgggcacgtcctcgcgacgggcatcgacggagccggccgccggcagtacatgtaccac
ccgtcgtggcgggagcggatggaccggatcaagtacgaccgggccctcgcgctggcggag
tcactgcccggcgcgcgtcggatggtgacgcaggacctccgccgaccggagcccgaccgt
cgacgcgcactggccgcggcgttccggatgctcgaccagggatcgctccgggtgggctcg
gagcgctacgcgaccgagcacgggagccgtgggctctcgacgctcctgtgcgcgcacgcc
cacgtctcggggaacgacatcgagctcgacttcccgggcaagagcgggcaggagtggtcc
tcgacgatccacgacgccgacctggcgcgggtgatcgccgggatgaagcgccgcggggcg
aacgcccggctgctggccttccgggagcgtcgcggcgccgagtgggagccgctcgccgcc
gaggacatcaacgagtacgtcaaggagcgcgccggcgacgcgttcaccgcgaaggacttc
cggaccctgcacgggaccgtggcggcagcggtcgacctggcgaagaccggcacgcagccc
agccaggcgaagcggaagaaggcggtgtcgcacgcggtgaaggccgccagcgaagagctc
ggcaacaccccgaccgtgtgccggcagagctacatcgacccgcggctgctcgatgcgtac
gagcacggcgagacgatcgacccggcgcggctgcacgcagcggagtccgaggtgcgcgcc
ctgctctaccgccagtga
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