Entry |
|
Symbol |
gyrB
|
Name |
(GenBank) DNA gyrase subunit B
|
KO |
|
Organism |
cus Corynebacterium ramonii FRC0011
|
Brite |
KEGG Orthology (KO) [BR:cus00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:cus03032]
CulFRC11_0005 (gyrB)
03400 DNA repair and recombination proteins [BR:cus03400]
CulFRC11_0005 (gyrB)
Enzymes [BR:cus01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CulFRC11_0005 (gyrB)
DNA replication proteins [BR:cus03032]
Prokaryotic type
DNA Topoisomerases
CulFRC11_0005 (gyrB)
DNA repair and recombination proteins [BR:cus03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CulFRC11_0005 (gyrB)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
5597..7642
|
AA seq |
681 aa
MATAEHEYGASSITILEGLEAVRKRPGMYIGSTGERGLHHLVWEVVDNSVDEAMAGHATH
VDVTLLEDGGVEVVDNGRGIPVDMHASGAPTVQVVMTQLHAGGKFDSDSYAVSGGLHGVG
ISVVNALSTRVEADIKLHGKHWYQNFSHAVPDELVQGGNARGTGTTIRFWPDAEIFETTT
FKFDIIARRLQEMAFLNKGLTLSLTDKRVSDEELELEAIADEGDTAENVSLEKIDSDADG
NIEAPAAPKKREKKKVFYYPEGLKDYVAHLNKSKQVIHPTIVAFEAKGEDHEVEVAMQWN
NGYAQSVHTFANTINTIEGGTHEEGFRAALTTLMNRYAREHRLLKEKESNLTGDDCREGL
SAVISVRVGDPQFEGQTKTKLGNTEVKGFVQRMVNEHVADWLDANPAEAKTIINKAVSSA
HARMAARKARDLVRRKSATDLGGLPGKLADCRSKDPVKSELYVVEGDSAGGSAKAGRDSL
YQAILPLRGKILNVEKARLDKVLKNAEVQAIITALGTGIHDEFDINKLRYHKIVLMADAD
VDGSHIATLLLTLLFRFMPQLIEEGHVYLAQPPLYKLKWGKGDPGFAYSDAERDSLLEEG
LAQGRKINKDDGIQRYKGLGEMNASELWETTLDPEFRVLRRVDINDAQRADEIFSILMGD
DVAARRSFITRRAKDVRFLDI |
NT seq |
2046 nt +upstreamnt +downstreamnt
gtggcaaccgctgaacatgaatatggcgcctcatccattacgatcctcgagggtctagag
gctgtacgtaagcgccccggtatgtacatcggatcgaccggtgaacgcggcctacaccat
ttggtgtgggaggtcgtggataactccgtcgatgaggcgatggctggtcacgccacgcat
gtcgacgtcacactgctggaagacggcggcgttgaggtcgtggataacggccgtggcatc
cccgtcgatatgcacgcgtccggtgctccgacggtgcaggtcgttatgacgcagctccac
gcgggcggcaagttcgactctgattcctatgccgtctctggtggtcttcacggcgtgggc
atctctgtggtcaacgcgctgtccactcgcgttgaagccgatattaaacttcatggcaag
cactggtatcagaacttctctcacgcggttccggacgagttggtccagggtggaaatgcg
cggggaaccggaactaccatccggttctggccggatgctgagatttttgaaaccaccacg
tttaaattcgacatcattgcacgccgcttgcaggaaatggcgttcctgaacaagggactc
accctttctctgaccgataagcgcgtgagcgatgaggaacttgagctggaagcaatcgcc
gatgagggcgataccgcagagaacgtttcgctggaaaaaatagattccgatgctgatggc
aacatcgaggcccctgctgcaccgaagaaacgcgagaagaaaaaggtcttttattacccc
gaggggctcaaagactatgttgcgcatctgaataagtctaagcaggtcattcacccgacc
atcgtcgcctttgaagccaaaggggaggaccacgaggttgaggtggctatgcagtggaac
aatggttatgcgcaaagcgtgcatacttttgctaacaccatcaacaccattgagggcggt
acccatgaagagggcttccgcgctgcactcacaacgttgatgaaccgctatgcccgtgaa
caccggttgctcaaagaaaaagaatctaaccttaccggtgacgattgccgtgagggactt
tctgcagttatttccgtccgcgtgggcgatcctcaattcgagggacagactaagacaaag
ctcggtaacactgaggtcaagggctttgtccagcgcatggttaatgaacatgtggcggat
tggctagatgcgaaccccgcagaagcaaagaccatcattaataaagctgtgtcgtctgcc
catgctcgtatggcagcacgcaaggcccgtgacctggtgcgtcgcaagtctgcaacagat
cttggtggccttccaggcaagctagcagattgccgttctaaagatcccgtgaagtctgaa
ctttatgtggtggagggcgattccgcaggcggttcggctaaagcaggccgagactccctt
taccaggcaattcttcctctgcgcggaaaaatcctgaatgtggaaaaggctcgactggat
aaggtgctcaagaacgccgaggttcaagcgatcatcactgctttgggcaccggcattcac
gacgagttcgatatcaataaactgcgctaccacaagattgttcttatggccgacgctgac
gtggacggctcccacatcgctacgctgctgcttactctcttgttccgcttcatgcctcag
ctcatcgaggaaggccacgtgtatctggcccaaccacctctgtacaagcttaagtggggt
aagggtgacccaggctttgcgtattcggatgccgagcgcgactcactcttggaagagggc
ttagctcagggacgtaagatcaacaaggatgacggaatccagcgttacaagggtctgggc
gagatgaatgccagtgagctgtgggaaaccacgcttgatccagagttccgtgtattgcgt
cgtgtggacatcaatgacgcacagcgtgctgatgaaattttctctatcttgatgggtgat
gacgttgctgcgcgtcgtagctttatcacgcgtagggcaaaggacgttcgtttccttgat
atctag |