Corynebacterium ramonii FRC0011: CulFRC11_0893
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Entry
CulFRC11_0893 CDS
T03408
Symbol
rho
Name
(GenBank) Transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
cus
Corynebacterium ramonii FRC0011
Pathway
cus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CulFRC11_0893 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cus03021
]
CulFRC11_0893 (rho)
03019 Messenger RNA biogenesis [BR:
cus03019
]
CulFRC11_0893 (rho)
Transcription machinery [BR:
cus03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CulFRC11_0893 (rho)
Messenger RNA biogenesis [BR:
cus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CulFRC11_0893 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIU32478
UniProt:
A0ABM5RR85
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All DBs
Position
952637..955036
Genome browser
AA seq
799 aa
AA seq
DB search
MLSSRFRSSPPNCCQGRAGGAMLPRMCAFLTHSVGILGHLRHQYLNPVNSTACFPVVVTW
LNIFPVTSFSAGKGDERTSVTTTDNGAQRNLAALRLPELRKIAAEMGLKGTSALRKGDLI
AAISGAQGGKAAQGGRSTASAAKHTTETKTAPKAKKDSAPAENSAAEASNAQQEKADQAP
AKEPKARRRRVLKTTGTTAATNDAVSNESIAQASAPVEEEKPRRRRATRRVETPSEKHGS
AESSSQDKAGMSADVNDGAAGSVEHGDADDENRYESRSAARRARRNRARREHREDRQVSQ
REDNRSENDQASHDGERRKDAPVDSTKAEERREAPEHQATDQQQTRESREGSENEHPRQR
NGRHHERGERGDRGDRNDRNRRNRRNRRGRDRDDNRDNTNIEPREDEVLQNIAGILDIVD
SNVAFVRTSGYHAGPADVYVNNQMIRRLGLRAGDAIVGQVRMNGDNSHGGHHGHNRGRNR
QKYNPLVRVESVNGMSIEEAKARPDFSKLTPLYPNQRLRLETEPKILTTRVIDLIMPIGK
GQRALIVSPPKAGKTTILQNIANAIATNNPECYLMVVLVDERPEEVTDMQRSVKGEVIAS
TFDRPPSEHTAVAELAIERAKRLVEQGQDVVVLLDSITRLGRAYNNSSPASGRILSGGVD
SNALYPPKRFLGAARNIENGGSLTIIATAMVETGSAGDTVIFEEFKGTGNAELKLDRKIS
ERRVFPAVDVNPSGTRKDELLLVPEEARIMHKLRRILAALDNQQAIDLLIKQLKKTKSNG
EFLMQIASSAPMAADAEEE
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
gtgctcagttcccgctttagaagttcaccaccgaattgctgccaaggccgcgccggcggg
gcaatgcttcctcgtatgtgtgcgttcttaacgcattcggtagggattctcgggcatcta
cgccatcagtacctgaatccagttaattccacagcatgctttccagtggtggttacttgg
ttgaacattttcccggtgacttctttttccgctggtaaaggcgatgaaaggacatctgtg
acaacaacagataacggcgcacagcgtaatcttgctgcattgcgtctgcccgagctgcgc
aagatcgccgctgaaatgggcctgaaaggcacctctgcactacgcaaaggtgatctcatt
gccgcgattagtggcgcgcaggggggaaaggctgcacaaggcggacgtagtaccgcatct
gcagcaaagcacacgacggaaacaaaaactgcgccaaaggcaaagaaggattctgcgcct
gcagaaaactcagccgcagaggcttctaatgcccaacaagaaaaggctgatcaggctccg
gctaaagagccaaaggcacgtcgtcgtcgagttctgaagacaacgggaaccaccgcggca
acaaatgacgcggtttccaatgagtccattgcgcaggcgtctgcgcccgtggaagaagaa
aagccgcgccgtcgtcgcgcgactcgtcgtgtagaaaccccttcagagaagcacggctct
gcagaaagctcctcacaggacaaagcgggcatgtccgctgacgtgaacgatggggcagcg
ggatccgtggaacatggcgatgctgatgatgaaaaccgctacgaatcgcgctcggctgct
cgacgcgctcgtcgtaaccgtgctcgacgggagcaccgcgaggaccggcaggtttctcag
cgagaagataatcgctctgagaatgatcaggcttcccacgatggggaacgacgtaaagac
gcacctgttgatagcacgaaagcagaggaacgtcgggaagctcctgagcatcaagctaca
gatcagcagcagactcgggaatcccgtgaaggttctgaaaacgagcatcctcgtcagcgc
aatggccgccatcatgagcggggcgagcgcggtgaccgaggcgatcgtaatgatcgtaat
cgccgtaatcgccgtaaccgacgtggtcgtgatcgcgacgataaccgggataacaccaac
attgagcctcgtgaagacgaagttttgcagaacatcgccggcatcctcgacatcgtggat
agcaatgtcgcttttgttcgcacgtcgggctaccacgctggtcccgcagacgtctatgta
aataaccagatgattcgtcgcttgggcctacgtgccggcgatgccatcgttggccaggtc
cggatgaatggcgataatagccatggcggacatcatggacacaaccgtggacgcaaccgt
caaaagtacaatccgctggttcgcgttgaatctgtcaacggcatgtccatagaggaagct
aaggcccgtccggacttctctaagctcactccgctgtacccgaaccagcgactgcgtttg
gaaaccgaaccaaagatccttaccactcgtgtgatcgacttgatcatgcctattggtaaa
ggtcagcgtgcgcttatcgtgtctccgccgaaagctggtaagacgacgattttgcagaac
attgctaacgccattgctaccaataaccctgagtgctacttgatggtagtgcttgtcgac
gagcgccccgaggaagtcaccgacatgcagcgctccgtcaagggcgaggttattgcctcc
accttcgatcgtccaccaagcgagcataccgctgtagctgagttggcaatcgagcgtgct
aagcgactcgttgaacagggacaagacgttgtggtgcttctagactccatcacacgcctt
ggtcgtgcttacaacaactcttctcctgcttcaggccgtatcctgtccggtggtgtggac
tcgaatgccctctacccgccaaagcgtttcctaggcgcagctcgtaacatcgaaaatggt
ggctccttgaccatcatcgctactgcaatggtagaaactggctctgcaggcgacaccgtg
atcttcgaggaattcaagggaaccggtaacgcagaactcaagctggatcgcaagatctcc
gagcgtcgcgtattcccggcagtggacgttaacccgtcaggaactcgtaaagatgagctt
cttctggttcctgaggaagcccgcattatgcacaaactacgcaggattcttgcagccttg
gacaatcagcaggccatcgatctgctgatcaagcagctcaagaagactaaatccaacggt
gagttcttgatgcagattgcatcgagtgctccgatggctgcagacgccgaggaggagtaa
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