Corynebacterium ramonii FRC0011: CulFRC11_1313
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Entry
CulFRC11_1313 CDS
T03408
Symbol
gatR
Name
(GenBank) Galactitol utilization operon repressor
KO
K03436
DeoR family transcriptional regulator, fructose operon transcriptional repressor
Organism
cus
Corynebacterium ramonii FRC0011
Brite
KEGG Orthology (KO) [BR:
cus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cus03000
]
CulFRC11_1313 (gatR)
Transcription factors [BR:
cus03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
CulFRC11_1313 (gatR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
GntR
HTH_11
HVO_A0261_N
HTH_PafC
HTH_20
Put_DNA-bind_N
HTH_Crp_2
HTH_28
HTH_23
Rrf2
DUF8612
HVO_A0114
B12-binding
FeoC
MarR_2
DUF4423
HTH_5
PqqD
Motif
Other DBs
NCBI-ProteinID:
AIU32882
UniProt:
A0ABM5RT09
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Position
1434568..1435344
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AA seq
258 aa
AA seq
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MYSEERRRQIASLTAVEGRVNVTELAARFDVTAETIRRDLAVLDREGVVHRVHGGAVANQ
TFQTTEFSLDTRARSASGAKNSIAHAALSYLPESHGGMFLDAGTTTAALAELLSVQPAAK
HWSIVTNSLSIALTLANSGLDEIQLLGGSVRAITQAVVGDTALRTLALMRADVAFIGTNA
LTIDHGLSTADSQEAAIKSAMITNAHKVVVLCDSTKMGTDYLVSFGSINDIDVVITDSNA
PESFIKALREHDVEVITA
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgtactcagaagaacgacggcgccaaatagcttctcttacggcggtagaggggcgcgtc
aatgtcactgagcttgccgcccgatttgatgttaccgctgagactatccgtcgagatctg
gcagtgctggaccgtgagggagtcgttcatcgagttcatggcggtgctgtggcaaatcaa
acattccaaaccaccgaattcagtttggatactcgtgcgcgttcagcatccggagctaaa
aactccattgcgcacgccgctttgtcatatctccctgaatctcatggtggaatgttcctt
gatgcaggtacgaccacagctgctttggcggaacttttgtcggttcaaccagctgcaaaa
cattggtcaatcgttaccaacagcctctccatcgcgttaaccctagccaactcagggctc
gacgagatccagcttcttggtggtagcgtacgcgcaatcacgcaagccgtcgtgggtgac
actgcgctacgaacattagctctcatgcgcgcagatgtcgcctttatcgggacaaatgcg
ctgacaatcgatcacggcctttccaccgctgattctcaagaagcagcaatcaaatcagcc
atgatcacaaatgcacataaagtggtcgtcttgtgcgactcaacaaaaatgggaaccgat
tatcttgtcagctttggttccatcaacgacatagacgtagtgattacagactcaaatgct
cccgaatcattcattaaagccctccgcgaacatgacgttgaggtcatcaccgcgtaa
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