Corynebacterium ramonii FRC0011: CulFRC11_1355
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Entry
CulFRC11_1355 CDS
T03408
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cus
Corynebacterium ramonii FRC0011
Brite
KEGG Orthology (KO) [BR:
cus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cus03016
]
CulFRC11_1355 (truB)
Enzymes [BR:
cus01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CulFRC11_1355 (truB)
Transfer RNA biogenesis [BR:
cus03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CulFRC11_1355 (truB)
Prokaryotic type
CulFRC11_1355 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AIU32924
LinkDB
All DBs
Position
1479215..1480126
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AA seq
303 aa
AA seq
DB search
MIDPLSTSGLVVVDKPAGMTSHDVVGRLRRIFGTKRVGHAGTLDPMATGVLVVGIERGTK
FLAHMVASTKSYRATIRLGMSTTTDDKEGEAVFAADTSTVSAITDDEIAAEIAKLTGNIM
QRPASVSAIKINGKRAHQMVREGQEVEIPARPVTIYRFDVLNISRALSPEFIDIDVEVTC
SSGTYIRSLARDLGEALHVGGHLTALRRLSVGPFTLSDAITLDDLATAPKLSLSLDESLT
RCYPTLEITESEATDLSMGKWLQPRGLTEVHAAVAPNGYTIALIKEKGKRLSSVFVARPN
TLS
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgattgatcccctctccacttctggactcgtagtcgtcgataaacccgctggcatgacc
tcgcatgacgtagttgggcgcttgcgccgtatctttggcactaaacgggttggtcacgcg
ggtaccctcgaccccatggctaccggtgttcttgttgtgggaatcgaaagagggacaaaa
tttcttgcccatatggtcgcatcgactaagtcctaccgagcaactatcagacttgggatg
tccaccaccaccgacgataaagagggagaagcagtttttgctgccgatacctccacggta
tccgcgatcaccgacgatgagattgctgctgagatagctaagctcactggaaatatcatg
caacgcccagcatcagtcagcgcaatcaaaatcaacgggaagcgagcccatcaaatggtg
cgtgaggggcaagaagtagagatacccgcacgtccggtcactatttaccggttcgatgtc
ctcaatatttcgcgcgctttatcaccggaattcattgacatcgatgtagaggtcacgtgt
tcatcgggcacgtatatccggtctctcgctcgtgatctaggagaagccctccatgtgggt
ggccatctcacagctttacgacgcctatccgtgggccccttcaccctttccgacgccatt
actctcgacgatctcgcaaccgcccccaaactcagtctttctttggatgaatccttaact
cggtgctaccccacattagagatcacagaatctgaagccacagatctttctatgggaaaa
tggctccaaccacgcggcttaacagaggttcacgcagcggtagcacccaatggctacacc
atcgcgcttatcaaggaaaaaggcaagcggctttcttccgttttcgtcgcgcgtcccaac
acgctctcctag
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