Entry |
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Symbol |
rpoC
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Name |
(GenBank) DNA-directed RNA polymerase, beta' subunit, predominant form
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KO |
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Organism |
cut Corynebacterium uterequi
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:cut00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CUTER_01515 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:cut03021]
CUTER_01515 (rpoC)
03400 DNA repair and recombination proteins [BR:cut03400]
CUTER_01515 (rpoC)
Enzymes [BR:cut01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CUTER_01515 (rpoC)
Transcription machinery [BR:cut03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CUTER_01515 (rpoC)
DNA repair and recombination proteins [BR:cut03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CUTER_01515 (rpoC)
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
316524..320564
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AA seq |
1346 aa
MFDVNLFDELRIGLATADDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
QCGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITSVDDEARHADLSTLEAEMLLEKKDVQEDAESEIAERQVNLEQD
LAELEAEGAKADVRRKVQNAATKEMQHIRERAEREIDRLEEIWQTFVKLAPKQMIIDETI
YEELVDRYEDYFTGGMGAEAIQTLIRNFDIDAEVEELTEIINSGKGQKKIRALKRLKVVA
AFQRSGNDPAAMVLDAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIEL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVSGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVENDYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVLLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGKPLAMPRLDMVTGLYFLTMDKAEDEIGGQ
GGYRPEKWSVAEGEEHEAGSQQGVFSSYAEAIMARDRGVLGLQAPIKVRISHLRPPADIE
AEQFPDGWQRGQAWTARTTLGRIMFNDLLPWNFPYLEGVMVRKGGGSKKVLLGDVISELT
NKYPMIAVAQTLDKLKDAGFYWATRSGVTITMDDVLILPNKIEILESYEKEAENIERKYW
DMGALTERERYDRLVELWQDATNTVGQAVENLYPDDNPIPMIVKSGAAGNMRQIWTLAGM
KGMVVNSKGDYITRPIKTSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDV
AQDVIVREDDCGTRQGVRVPVSEPVLDAAGEVTGHRRHSLVETSLSGRVLAGDLKDDAGE
ILLAAGTDLTEERIDTLVERGIAEVKVRSVLTCQTSTGVCAKCYGKSMASGHLVDIGEAV
GIVAAQSIGEPGTQLTMRTFHQGGVGGDITGGLPRVQELFEARVPKNRAPIASVAGTISL
EDEGNFWTLRITPDDGGDDVIYEKLSKRQGLAQVRRPMESNPQAMIERSLTEGDHVEVGD
RLLRGAADPHDVLEVLGRRGVEKHLIDEVQAVYRTQGVAIHDKHIEIIIRQMLRRGTVID
SGSTAFLPGTLVDLSEAKQANASALADGGQPAELRSEIMGITKASLATESWLSAASFQET
TRVLTDAAINKRSDALMGLKENVIIGKLIPAGTGISRYRNITVNTKDSSTFDYSLGGASA
IYGDEAAEAEYTGKSVPLDEAYDFGY |
NT seq |
4041 nt +upstreamnt +downstreamnt
gtgttcgacgtaaacctcttcgacgagcttcgcattggcctggctaccgccgacgacatc
cgccgttggtccaagggtgaggtcaagaagccggagacgattaactaccgcaccctcaag
ccggagaaggacggcctgttctgtgagcgcatcttcggccccacccgggactgggagtgc
cagtgcggtaagtacaagcgcgtgcgatacaagggcatcatctgtgagcgctgtggcgtc
gaggtgaccaagtccaaggttcgccgtgagcgcatgggccacatcgagctcgccgccccg
gtgacccacatctggtacttcaagggtgttccgtcccgcctgggttacctgctggacctc
gctccgaaggacctggagcgcatcatctacttcgccgccaacatcatcaccagcgtcgat
gacgaggcccgccacgcggacctgtccacgctggaagcggagatgctgctggagaagaag
gacgtccaggaagacgcggaatcggagatcgccgagcgtcaggtgaacctggagcaggac
ctcgccgagctggaggccgagggcgccaaggcggacgtgcgccgcaaggtgcagaacgcc
gcgacgaaggaaatgcagcacatccgcgagcgggccgagcgggagatcgaccgcctggag
gagatctggcagaccttcgtcaagctggccccgaagcagatgattatcgacgagaccatc
tacgaggagctcgtcgaccgctacgaggattacttcaccggcggcatgggcgcggaggct
atccagaccctcatccgcaacttcgacatcgacgccgaggtcgaggagctcaccgagatc
atcaactcgggcaagggccagaagaagatccgtgcgctcaagcgcctcaaggtcgtcgcc
gcgttccagcgttccggcaacgacccggcggcgatggtgctcgacgccatcccggtgatc
ccgccggagctgcgcccgatggtgcagctcgacggtggccgtttcgccacctccgacctc
aacgacctgtaccgtcgcgtcatcaaccgcaacaaccgcctcaagcggatgattgagctg
ggcgcgccggagatcatcgtcaacaacgaaaagcgcatgctgcaggagtctgtggacgcg
ctcttcgacaacggccgccgcggccgcccggtctccggtccgggcaaccgcccgctgaag
tccctgtccgacctgctcaagggcaagcagggccgcttccgccagaacctgctgggtaag
cgcgtggactactcgggtcgttccgttattatcgtcggcccgcagctcaagctgcacgag
tgcggcctgccgaagctcatggccctggagctgttcaagcccttcgtcatgaagcgcctg
gtggaaaacgactacgcgcagaacatcaagtccgccaagcgcatggtggagcgccagcgc
cccgaggtgtgggacgtcctcgaagaggccatctccgagcacccggtgctgctcaaccgc
gccccgacgctgcaccgcctgggcattcaggccttcgagccgaagctggtcgagggcaag
gccatccagctgcacccgctggcttgtgaggcgttcaacgcggacttcgacggcgaccag
atggccgtccacctgccgctgtccgccgaggcccaggccgaggcccgcatcctcatgctg
tcctcgaacaacatcctgtccccggcctccggcaagccgctggctatgccgcgcctggac
atggtcactggcctgtacttcctcaccatggacaaggccgaggatgagatcggtggccag
ggcggttaccgtccggagaagtggtccgtcgccgagggcgaggagcacgaggccggctcg
cagcagggtgtgttctcctcctacgcggaggcgatcatggcccgcgaccgcggcgtgctg
ggcctgcaggccccgatcaaggtgcgcatctctcacctgcgcccgccggccgacatcgag
gcggagcagttccccgacggctggcagcgcggccaggcctggacggcgcgcaccacgctg
ggccggatcatgttcaacgacctgctgccgtggaacttcccgtacctggaaggcgtcatg
gtccgtaagggcggcggctccaagaaggtgctgctcggtgacgtcatctctgagctgacg
aacaagtacccgatgatcgcggtggcgcagacgctggacaagctcaaggacgccggtttc
tactgggcgacccgctccggcgtgaccatcacgatggacgacgtgctcatccttccgaac
aagatcgaaatcctcgaatcttacgagaaggaagcggagaacatcgagcgcaagtactgg
gacatgggtgccctgacggagcgcgagcgctacgaccgactggtggagctgtggcaggac
gccaccaacaccgtgggtcaggcggtggagaacctctacccggatgacaacccgattccg
atgatcgtgaagtcgggcgcggccggtaacatgcgccagatctggaccctggccggcatg
aagggcatggtcgtgaactccaagggtgactacatcacccgcccgatcaagacctccttc
cgcgagggcctgtcggttctggagtacttcaacaactcgcacggctcccgtaagggcctg
gccgataccgcgctgcgtaccgccgactccggctacctcacgcgtcgtctcgtcgacgtc
gcccaggacgtcatcgtccgcgaggatgactgcggcacccgccagggcgtgcgcgtcccg
gtctcggagccggtcctcgacgccgccggtgaggtcaccggccaccgtcgccactcgctc
gtcgagacgtccctgtcgggccgcgtcctcgccggcgacctcaaggacgacgcgggggag
atcctcctcgccgccggcaccgacctcaccgaggagcgcatcgacaccctcgtcgagcgc
ggcatcgccgaggtcaaggtccgctccgtgctgacctgccagacgtccaccggcgtgtgc
gccaagtgctacggcaagtccatggcctccgggcacctggtggacatcggcgaggcggtc
ggcatcgtcgccgcccagtcgattggcgagcccggtacccagctgaccatgcgtaccttc
caccagggcggtgtcggcggcgacatcaccggcggtctgccgcgtgttcaggagctgttc
gaggcccgcgtgccgaagaaccgcgccccgatcgcctccgtggcgggcaccatctcgctc
gaggacgaaggcaacttctggaccctgcgcatcaccccggacgacggcggcgacgatgtt
atctacgagaagctgtcgaagcgccagggcctggcccaggtccgccgcccgatggagtcc
aacccgcaggcgatgatcgagcgttcgctcaccgagggtgaccacgtggaggtgggcgac
cgcctgctgcgtggcgccgccgacccgcacgacgtgctggaggtcctcggccgccgtggc
gtggagaagcacctcatcgacgaggtgcaggccgtgtaccgcacccagggtgtggccatt
cacgacaagcacatcgagatcatcatccggcagatgctgcgccgcggcacggtcatcgac
tccggttccacggccttcctgccgggtaccctcgttgacctgtccgaggcgaagcaggcg
aacgcgtcggcgctggccgacggtgggcagccggccgagctgcgcagcgagatcatgggt
atcaccaaggcctcgctggcgaccgagtcgtggctgtccgcggcctccttccaggagacc
acgcgcgtgctcaccgatgcggcgatcaacaagcgctccgacgccctcatgggcctgaag
gagaacgtcatcatcggtaagctcatcccggccggtacgggcatttcccgctaccgcaac
atcaccgtgaacacgaaggactcctcgaccttcgattactcgctcggtggggcgtcggcc
atctatggcgacgaggctgccgaggcggagtacacgggcaagtcggtgccgctggatgag
gcgtacgacttcggctactaa |