KEGG   Corynebacterium uterequi: CUTER_01515
Entry
CUTER_01515       CDS       T03957                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit, predominant form
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
cut  Corynebacterium uterequi
Pathway
cut03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cut00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CUTER_01515 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cut03021]
    CUTER_01515 (rpoC)
   03400 DNA repair and recombination proteins [BR:cut03400]
    CUTER_01515 (rpoC)
Enzymes [BR:cut01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CUTER_01515 (rpoC)
Transcription machinery [BR:cut03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CUTER_01515 (rpoC)
DNA repair and recombination proteins [BR:cut03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CUTER_01515 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-ProteinID: AKK10319
UniProt: A0A0G3HAG2
LinkDB
Position
316524..320564
AA seq 1346 aa
MFDVNLFDELRIGLATADDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
QCGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITSVDDEARHADLSTLEAEMLLEKKDVQEDAESEIAERQVNLEQD
LAELEAEGAKADVRRKVQNAATKEMQHIRERAEREIDRLEEIWQTFVKLAPKQMIIDETI
YEELVDRYEDYFTGGMGAEAIQTLIRNFDIDAEVEELTEIINSGKGQKKIRALKRLKVVA
AFQRSGNDPAAMVLDAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIEL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVSGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVENDYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVLLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGKPLAMPRLDMVTGLYFLTMDKAEDEIGGQ
GGYRPEKWSVAEGEEHEAGSQQGVFSSYAEAIMARDRGVLGLQAPIKVRISHLRPPADIE
AEQFPDGWQRGQAWTARTTLGRIMFNDLLPWNFPYLEGVMVRKGGGSKKVLLGDVISELT
NKYPMIAVAQTLDKLKDAGFYWATRSGVTITMDDVLILPNKIEILESYEKEAENIERKYW
DMGALTERERYDRLVELWQDATNTVGQAVENLYPDDNPIPMIVKSGAAGNMRQIWTLAGM
KGMVVNSKGDYITRPIKTSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDV
AQDVIVREDDCGTRQGVRVPVSEPVLDAAGEVTGHRRHSLVETSLSGRVLAGDLKDDAGE
ILLAAGTDLTEERIDTLVERGIAEVKVRSVLTCQTSTGVCAKCYGKSMASGHLVDIGEAV
GIVAAQSIGEPGTQLTMRTFHQGGVGGDITGGLPRVQELFEARVPKNRAPIASVAGTISL
EDEGNFWTLRITPDDGGDDVIYEKLSKRQGLAQVRRPMESNPQAMIERSLTEGDHVEVGD
RLLRGAADPHDVLEVLGRRGVEKHLIDEVQAVYRTQGVAIHDKHIEIIIRQMLRRGTVID
SGSTAFLPGTLVDLSEAKQANASALADGGQPAELRSEIMGITKASLATESWLSAASFQET
TRVLTDAAINKRSDALMGLKENVIIGKLIPAGTGISRYRNITVNTKDSSTFDYSLGGASA
IYGDEAAEAEYTGKSVPLDEAYDFGY
NT seq 4041 nt   +upstreamnt  +downstreamnt
gtgttcgacgtaaacctcttcgacgagcttcgcattggcctggctaccgccgacgacatc
cgccgttggtccaagggtgaggtcaagaagccggagacgattaactaccgcaccctcaag
ccggagaaggacggcctgttctgtgagcgcatcttcggccccacccgggactgggagtgc
cagtgcggtaagtacaagcgcgtgcgatacaagggcatcatctgtgagcgctgtggcgtc
gaggtgaccaagtccaaggttcgccgtgagcgcatgggccacatcgagctcgccgccccg
gtgacccacatctggtacttcaagggtgttccgtcccgcctgggttacctgctggacctc
gctccgaaggacctggagcgcatcatctacttcgccgccaacatcatcaccagcgtcgat
gacgaggcccgccacgcggacctgtccacgctggaagcggagatgctgctggagaagaag
gacgtccaggaagacgcggaatcggagatcgccgagcgtcaggtgaacctggagcaggac
ctcgccgagctggaggccgagggcgccaaggcggacgtgcgccgcaaggtgcagaacgcc
gcgacgaaggaaatgcagcacatccgcgagcgggccgagcgggagatcgaccgcctggag
gagatctggcagaccttcgtcaagctggccccgaagcagatgattatcgacgagaccatc
tacgaggagctcgtcgaccgctacgaggattacttcaccggcggcatgggcgcggaggct
atccagaccctcatccgcaacttcgacatcgacgccgaggtcgaggagctcaccgagatc
atcaactcgggcaagggccagaagaagatccgtgcgctcaagcgcctcaaggtcgtcgcc
gcgttccagcgttccggcaacgacccggcggcgatggtgctcgacgccatcccggtgatc
ccgccggagctgcgcccgatggtgcagctcgacggtggccgtttcgccacctccgacctc
aacgacctgtaccgtcgcgtcatcaaccgcaacaaccgcctcaagcggatgattgagctg
ggcgcgccggagatcatcgtcaacaacgaaaagcgcatgctgcaggagtctgtggacgcg
ctcttcgacaacggccgccgcggccgcccggtctccggtccgggcaaccgcccgctgaag
tccctgtccgacctgctcaagggcaagcagggccgcttccgccagaacctgctgggtaag
cgcgtggactactcgggtcgttccgttattatcgtcggcccgcagctcaagctgcacgag
tgcggcctgccgaagctcatggccctggagctgttcaagcccttcgtcatgaagcgcctg
gtggaaaacgactacgcgcagaacatcaagtccgccaagcgcatggtggagcgccagcgc
cccgaggtgtgggacgtcctcgaagaggccatctccgagcacccggtgctgctcaaccgc
gccccgacgctgcaccgcctgggcattcaggccttcgagccgaagctggtcgagggcaag
gccatccagctgcacccgctggcttgtgaggcgttcaacgcggacttcgacggcgaccag
atggccgtccacctgccgctgtccgccgaggcccaggccgaggcccgcatcctcatgctg
tcctcgaacaacatcctgtccccggcctccggcaagccgctggctatgccgcgcctggac
atggtcactggcctgtacttcctcaccatggacaaggccgaggatgagatcggtggccag
ggcggttaccgtccggagaagtggtccgtcgccgagggcgaggagcacgaggccggctcg
cagcagggtgtgttctcctcctacgcggaggcgatcatggcccgcgaccgcggcgtgctg
ggcctgcaggccccgatcaaggtgcgcatctctcacctgcgcccgccggccgacatcgag
gcggagcagttccccgacggctggcagcgcggccaggcctggacggcgcgcaccacgctg
ggccggatcatgttcaacgacctgctgccgtggaacttcccgtacctggaaggcgtcatg
gtccgtaagggcggcggctccaagaaggtgctgctcggtgacgtcatctctgagctgacg
aacaagtacccgatgatcgcggtggcgcagacgctggacaagctcaaggacgccggtttc
tactgggcgacccgctccggcgtgaccatcacgatggacgacgtgctcatccttccgaac
aagatcgaaatcctcgaatcttacgagaaggaagcggagaacatcgagcgcaagtactgg
gacatgggtgccctgacggagcgcgagcgctacgaccgactggtggagctgtggcaggac
gccaccaacaccgtgggtcaggcggtggagaacctctacccggatgacaacccgattccg
atgatcgtgaagtcgggcgcggccggtaacatgcgccagatctggaccctggccggcatg
aagggcatggtcgtgaactccaagggtgactacatcacccgcccgatcaagacctccttc
cgcgagggcctgtcggttctggagtacttcaacaactcgcacggctcccgtaagggcctg
gccgataccgcgctgcgtaccgccgactccggctacctcacgcgtcgtctcgtcgacgtc
gcccaggacgtcatcgtccgcgaggatgactgcggcacccgccagggcgtgcgcgtcccg
gtctcggagccggtcctcgacgccgccggtgaggtcaccggccaccgtcgccactcgctc
gtcgagacgtccctgtcgggccgcgtcctcgccggcgacctcaaggacgacgcgggggag
atcctcctcgccgccggcaccgacctcaccgaggagcgcatcgacaccctcgtcgagcgc
ggcatcgccgaggtcaaggtccgctccgtgctgacctgccagacgtccaccggcgtgtgc
gccaagtgctacggcaagtccatggcctccgggcacctggtggacatcggcgaggcggtc
ggcatcgtcgccgcccagtcgattggcgagcccggtacccagctgaccatgcgtaccttc
caccagggcggtgtcggcggcgacatcaccggcggtctgccgcgtgttcaggagctgttc
gaggcccgcgtgccgaagaaccgcgccccgatcgcctccgtggcgggcaccatctcgctc
gaggacgaaggcaacttctggaccctgcgcatcaccccggacgacggcggcgacgatgtt
atctacgagaagctgtcgaagcgccagggcctggcccaggtccgccgcccgatggagtcc
aacccgcaggcgatgatcgagcgttcgctcaccgagggtgaccacgtggaggtgggcgac
cgcctgctgcgtggcgccgccgacccgcacgacgtgctggaggtcctcggccgccgtggc
gtggagaagcacctcatcgacgaggtgcaggccgtgtaccgcacccagggtgtggccatt
cacgacaagcacatcgagatcatcatccggcagatgctgcgccgcggcacggtcatcgac
tccggttccacggccttcctgccgggtaccctcgttgacctgtccgaggcgaagcaggcg
aacgcgtcggcgctggccgacggtgggcagccggccgagctgcgcagcgagatcatgggt
atcaccaaggcctcgctggcgaccgagtcgtggctgtccgcggcctccttccaggagacc
acgcgcgtgctcaccgatgcggcgatcaacaagcgctccgacgccctcatgggcctgaag
gagaacgtcatcatcggtaagctcatcccggccggtacgggcatttcccgctaccgcaac
atcaccgtgaacacgaaggactcctcgaccttcgattactcgctcggtggggcgtcggcc
atctatggcgacgaggctgccgaggcggagtacacgggcaagtcggtgccgctggatgag
gcgtacgacttcggctactaa

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