Corynebacterium uterequi: CUTER_04235
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Entry
CUTER_04235 CDS
T03957
Name
(GenBank) DNA/RNA helicase, superfamily II
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cut
Corynebacterium uterequi
Pathway
cut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CUTER_04235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cut03019
]
CUTER_04235
03009 Ribosome biogenesis [BR:
cut03009
]
CUTER_04235
Enzymes [BR:
cut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CUTER_04235
Messenger RNA biogenesis [BR:
cut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CUTER_04235
Ribosome biogenesis [BR:
cut03009
]
Prokaryotic type
rRNA helicases
CUTER_04235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UvrA_inter
CMS1
adh_short
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AKK10853
UniProt:
A0A0G3HFW8
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All DBs
Position
881443..883647
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AA seq
734 aa
AA seq
DB search
MSMTDENATGGVNEPETITSESQNNPQGDAAQAAPAVEAPEAIDGVGQSTGDAESSEATG
SAAESTENVAPADNAEHTETSEESVDAEDAADPENEEEDKPGFDALGLSDDVLRAVKKVG
YETPSPIQAETIPVLMEGRDVVGLAQTGTGKTAAFALPILARIDVADRSPQALVLAPTRE
LALQVADSFQSFSDYLGDIHVLPIYGGQAYGIQLSGLRRGAHIIVGTPGRVIDHLDKGSL
DISNLRFLVLDEADEMLNMGFQEDVERILEDTPAEKQVALFSATMPNGIRRISRQYLDDP
VEVTVKAETRTNTNITQRYLFTAHRNKLDAITRILEVTEFEAMIVFVRTKHETEEIAEKL
RARGFSAAAINGDIAQQQRERTVDQLKDGRLDILVATDVAARGLDVERISHVLNYDIPHD
TESYVHRIGRTGRAGRSGEAILFVTPRERRMLRSIERVTNATIEEMELPTVDEVNESRKE
KFSDQITEALESDQLDVFRSLVKRYSEDKDVPMVDVAAALAAQAQSGDFLMKEPPPEKRG
RGRDRFDRDERRGRGRFDDDDRRGRGRSERRSDDDFDTYRLAVGKRQHVGPAAVVGALAN
EGGLSRHDIGRISIAVDHTLVGLPKNLDRSVLDRLQDTRISGVKIDIERDHSGHGGFGGD
RRGGRGDRRGGWRDRDDRGDRRGGRDDRRGGWRDRDDRGDRRGGRDDRRGGWRDRDDRGD
RRGGRGDRRGGWRD
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgaccgatgaaaacgccaccggcggcgtcaacgagccggagaccatcacgtcg
gaatctcagaacaacccgcaaggtgacgcagcacaggctgcgcccgcggtcgaggcccct
gaggccatcgacggcgtaggccagagcaccggggacgcggaatcttctgaggcaaccggc
tccgccgcggaatccactgagaatgtggcgccggcggacaacgcagaacacactgagacc
tcggaagaaagcgtcgacgcagaagacgcagccgaccccgaaaacgaagaggaggacaag
cccggcttcgacgcgctcggtctgagcgacgacgtcctccgcgccgtcaagaaggtggga
tacgagaccccgtcgccgatccaggcggagaccatcccggtcctgatggagggtcgagac
gtcgtcggcctggcccagaccggtactggtaaaacagccgccttcgcgttgccgatcctc
gcgcgtatcgacgtcgcggaccgctccccccaagccctcgtgctggcgccgacgcgcgag
ctggcgctccaggttgccgactccttccagtccttctctgattaccttggtgacatccac
gtcctgccgatctacggcggacaggcctacggcattcagctttcgggcttgcgtcgcggc
gcccacatcatcgtcggcaccccgggtcgtgtcatcgaccacctggataagggttcgcta
gacatctccaacctccgtttcctcgttcttgacgaggccgatgagatgctcaacatgggc
ttccaggaggacgtcgaacgcatcctggaggacaccccggctgagaagcaggttgcgctg
ttctccgcgacgatgcccaacggcatccgtcggatctcccggcagtacctcgacgatccc
gttgaggtcactgtcaaggcggaaacccgcaccaacaccaacatcacccagcgctacctc
ttcaccgcgcatcgcaacaagctcgacgccatcacccggatcctcgaagtcaccgagttt
gaggccatgatcgtcttcgtccgtacgaagcacgagaccgaggagatcgccgagaagctg
cgcgcccgcgggttctccgcggccgccattaacggcgacatcgcgcagcagcagcgcgag
cgcaccgtggaccagctcaaggacggccgcctggacatcctggtggccaccgacgtcgcc
gcgcgcggcctggacgtcgaacgcatcagccatgtgttgaactacgacatcccgcacgac
accgagagctacgtccaccgtatcggccgcaccggccgtgccggccgctctggtgaggcg
atcctcttcgtcaccccgcgcgagcgtcggatgctgcgttccatcgaacgcgtgacgaat
gccaccatcgaggagatggagctgcccacggtcgacgaggtcaacgaatcccgcaaggag
aagttctccgaccagatcaccgaggccctggagtccgaccagctcgacgtcttccgttcc
ctggttaagcgctactcggaggataaggacgtgcccatggtggacgtcgccgccgcgctc
gcagcccaggcccagtctggtgacttcctcatgaaggagccgccgcccgagaagcgtggc
cgcggccgtgaccgtttcgatcgtgacgagcgtcgcggtcggggtcgcttcgatgacgac
gatcgccgcggccggggccgcagcgagcgccgttcggacgacgacttcgatacctaccgc
ctggcagtcggcaagcgtcagcacgtcggtccggcggccgtggttggtgccttggccaac
gaaggtggtctgagccgccacgacatcggtcgcatctccatcgctgtcgatcacaccctc
gtcggactgccgaagaacctcgaccggtccgtgctggaccgcctacaggacacccgcatt
tccggtgtgaagatcgacatcgagcgcgatcattccggccacggaggcttcggcggtgat
cgccgcggcggccgtggcgatcgtcgtggtggttggcgggatcgtgatgatcgtggtgat
cgtcgcggtggccgtgatgaccgtcgtggtggttggcgggatcgtgatgatcgtggtgat
cgtcgcggtggccgtgatgaccgtcgtggcggctggcgggatcgtgatgatcgtggtgat
cgtcgcggtggccgtggcgatcgtcgtggcggctggcgcgactaa
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