Corynebacterium uterequi: CUTER_04415
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Entry
CUTER_04415 CDS
T03957
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cut
Corynebacterium uterequi
Pathway
cut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CUTER_04415 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cut03021
]
CUTER_04415 (rho)
03019 Messenger RNA biogenesis [BR:
cut03019
]
CUTER_04415 (rho)
Transcription machinery [BR:
cut03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CUTER_04415 (rho)
Messenger RNA biogenesis [BR:
cut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CUTER_04415 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
NACHT
Spore_III_AA
S1CSD-TOTE-2
SAP
HNF-1_N
Motif
Other DBs
NCBI-ProteinID:
AKK10888
UniProt:
A0A0G3HG06
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All DBs
Position
926977..928560
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AA seq
527 aa
AA seq
DB search
MSDTDTTDLSAMKLTELRALAASRGLKGISGLRKGQLVAALSSGAPVRQEPAREQPARPE
PTREEPPREESPRPAVASVASEETTPAEKAEHDRDGSSRPNRGRRGRRNRRNRRNREQRD
NANAEQQNGHQREPEPEELESVAGILDVVDNNAAFVRTTGYRSAPSDVFVNNNMVRRFDL
RSGDAIVGQVKVGGGGHTHGNGRNRRKYNQLVRVDSVNGMHPEEARKRPDFHKLTPLYPN
QRLRLETQPNILTTRVIDLVMPIGKGQRALIVSPPKAGKTTILQNIANAIATNNPECYLM
VVLVDERPEEVTDMQRSVKGEVIASTFDRPPAEHTAVAELAIERAKRLVEMGKDVVVLLD
SITRLGRAYNNSSPASGRILSGGVDSNALYPPKRFLGAARNIEHGGSLTIIATAMVETGS
AGDTVIFEEFKGTGNAELKLDRKISERRVFPAVDVNPTGTRKDELLMPPDEYRVMHKLRR
ILSALDSQAAIDLLIKQLKKTRSNGEFLMQVASSAPMAADKDVEEYL
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatacggacaccactgacttgagcgcgatgaagctcaccgagcttcgcgctctc
gctgccagccgagggctgaaggggatctcgggtttgcggaaggggcagctggtggctgct
ttgtcctccggcgccccggtccggcaggaaccggcccgagagcagccggcccgaccggaa
ccgacccgggaagaaccgccccgggaggaatccccccgaccggccgtagcctccgtagcc
tcggaagaaacgacgccggcggagaaggctgagcacgaccgtgacgggtcttctcgcccc
aaccgggggcggcgcggccgccgtaaccgacgcaaccgtcgaaaccgggagcagcgtgac
aacgccaacgccgagcagcagaacggccaccagcgcgaaccggagccggaggagctggag
tcggtggcgggcattctcgacgtggtcgataacaatgccgcgttcgtccgcacgacgggc
taccgctcggcaccgtctgatgtgttcgtcaacaacaacatggtgcgtcgctttgacctg
cgctccggcgacgcgatcgttggccaggtcaaggtcggcgggggtggacacacccacgga
aacggccgaaaccgccggaagtacaaccagctggtccgggtggattcggtcaatgggatg
cacccggaggaagcccgaaagcgccccgacttccacaagctcaccccgctgtacccgaac
cagcggctgcgcctggagacccagcccaacatccttacgacgcgcgtgatcgacttggtc
atgccgatcggtaagggccagcgtgcgctcatcgtctcgccgcctaaggctggtaagacg
acgattttgcagaacattgcgaacgcgatcgccacgaataacccggagtgttacctcatg
gtggtgctcgtcgacgagcgccccgaggaagtcaccgacatgcagcgctcggtcaagggc
gaggtcatcgcgtcgaccttcgaccgccccccggccgagcacactgccgtcgccgagctc
gccatcgagcgggcgaagcggctggtggagatgggcaaagacgtcgtcgtcctgctcgac
tcgatcacgcgactgggccgtgcgtataacaactcctcgccggcgtcggggcgcatcctt
tctggtggtgtcgactcgaacgcgttgtatccgccgaagcgtttcctcggcgcggcgcgc
aacattgagcacggcggtagcctcacgatcatcgccaccgccatggtcgagactggttcg
gcgggcgatacggtcatctttgaggagttcaagggcaccggcaacgcggagctgaagctg
gatcgcaagatctcggagcgtcgggtgttcccggccgtcgatgtcaatccgacgggtacg
cgcaaggatgagttgctcatgccgccggacgagtatcgggtgatgcacaagctgcgccgt
attctctccgcgctggattcgcaggcggcgattgatctgctcatcaagcagctgaagaag
acgaggtcgaatggcgagttcttgatgcaggtggcgtcgagcgctcccatggccgccgat
aaggatgtcgaggagtacctgtaa
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