Corynebacterium uterequi: CUTER_06380
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Entry
CUTER_06380 CDS
T03957
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03086
RNA polymerase primary sigma factor
Organism
cut
Corynebacterium uterequi
Brite
KEGG Orthology (KO) [BR:
cut00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CUTER_06380 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cut03021
]
CUTER_06380 (rpoD)
Transcription machinery [BR:
cut03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CUTER_06380 (rpoD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
TFIIA
SNaCT9
Motif
Other DBs
NCBI-ProteinID:
AKK11265
UniProt:
A0A0G3HEW5
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All DBs
Position
1335304..1337166
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AA seq
620 aa
AA seq
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MVATDSSDKAGTGEAEAPAASTPAKKAAKKTAKKAGARTAKKTARKAATKTTRKVAPASA
VSAPAEAAAEPAAPAVEDSVEAPATRKVAKKTTKKTTRKVAKKTTRKVSPASAVSAPAEA
AAEPATEPADAAAEESTAASTATKAAKKTAKKTTRKAAKKTAKKTAKKTTKKATKAAKKT
TRKTSRAAVAAVSEEAAESTLSEDKVGVEDVLEERTDLDNDVVGADEDFKDDLDGLDDHD
LEDDEFGDLATDLDDDDDLDRDDDEDEDEDDDEESEDEEDSEDDDGSSVWDEDESAALRQ
ARKDAQLTASADSVRAYLKQIGKVALLNAEEEVSLAKRIEAGLYAQYRLDEMARALSAGD
KDAKLSPSFKRDLRAVTRDGRKAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGL
IRAVEKFDYSKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQ
DLGREPTPQELAKEMDITEEKVLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSEAVVAV
DAVSFTLLQDQLQDVLTTLSEREAGVVRLRFGLTDGMPRTLDEIGQVYGVTRERIRQIES
KTMSKLRHPSRSQVLRDYLD
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
gtggtagccacagattcttctgacaaggcaggcaccggcgaggccgaagcgccagccgcc
tctaccccggccaagaaggccgccaagaagacggccaagaaggccggcgcccgaacggcg
aaaaagaccgcgcgcaaggcggccaccaagaccacccggaaggttgctcccgcctctgcc
gtgtcggccccggccgaggcagcagcggagccggcggccccggccgtcgaggactccgta
gaggctcccgccacccgcaaggtggctaagaaaacaaccaagaagaccacccggaaggtc
gccaagaaaaccacccgcaaggtctcccccgcctctgccgtgtcggccccggccgaggca
gccgcggaaccggctacggagcctgcggacgctgccgccgaagaatccactgcggcttcc
actgccaccaaggcggcgaagaagaccgccaagaagaccacccgtaaggcagcgaagaag
accgccaagaaaacggcgaagaagaccacgaagaaggccaccaaggcagcgaagaagact
actcggaaaacgtctcgcgccgcggttgccgcggtgtcggaggaggctgccgagtcgacg
ctgagcgaggataaggtcggcgtcgaggacgttctagaggaacgcactgatctcgataac
gacgtcgtgggtgcagacgaggacttcaaggatgacctcgacggattggatgaccacgac
ctggaggacgacgaattcggcgacctcgccaccgacctcgacgatgatgacgacctcgat
cgcgatgacgacgaggacgaagatgaggatgatgacgaggaatcggaggacgaagaggac
tccgaggacgacgacgggtcttccgtgtgggatgaggacgagtccgccgcgcttcgccaa
gcccgcaaggacgctcagctgaccgcctcggccgactcggtacgcgcctacctcaagcag
atcggcaaggtcgccctccttaacgccgaagaagaggtgtccctggcaaagcgcattgag
gccggcctctacgcccagtaccggcttgatgaaatggcccgtgcactcagcgcgggagac
aaggacgccaagctctccccgtcgttcaaacgcgacctccgggcggtcacccgggacgga
cgcaaagccaagaatcacctcctcgaagcaaacttgcgtctggtggtgtcgctagccaag
cggtataccggtcgcggcatggctttcctggacctcatccaggagggcaacctcggcctg
atccgcgccgtggagaaattcgattactccaagggatacaagttctccacctacgcgacg
tggtggatccggcaggccatcacgcgcgccatggcggatcaggctcgcacgattcgcatc
ccggtgcacatggtggaggtcatcaacaagcttggccggattcagcgcgaattgctccaa
gacctgggccgcgagcccacgccgcaggagcttgcgaaggagatggatatcaccgaggag
aaggtcctcgaaatccagcagtacgcgcgggagccgatctccttggatcagaccatcggt
gacgagggcgatagccaactcggtgacttcatcgaggactccgaagccgtagtggccgtc
gacgcggtgtccttcacgttgctgcaggaccaactccaggatgttctgaccaccctgtcc
gagcgagaggccggcgttgttcgcctgcgcttcggtctgacggacggtatgccgcgcaca
ttggatgagatcggccaggtttacggcgtcacccgggaacgcatccgccagatcgaatcc
aagacgatgtccaagctacgtcatccttcgcgctcgcaggtgttgcgcgactacctggac
taa
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