Cupriavidus sp. USMAA2-4: BKK79_05565
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Entry
BKK79_05565 CDS
T05072
Name
(GenBank) ribonuclease E/G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
cuu
Cupriavidus sp. USMAA2-4
Brite
KEGG Orthology (KO) [BR:
cuu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuu03019
]
BKK79_05565
03009 Ribosome biogenesis [BR:
cuu03009
]
BKK79_05565
Messenger RNA biogenesis [BR:
cuu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BKK79_05565
Ribosome biogenesis [BR:
cuu03009
]
Prokaryotic type
rRNA processing factors
BKK79_05565
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AOY91345
LinkDB
All DBs
Position
1:1246623..1248089
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AA seq
488 aa
AA seq
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MTEDILVNITPQETRVAIVQQAAVQELHVERTLTRGLVGNIYLGKVVRVLPGMQSAFIDI
GLERAAFLHVADIWHPRDGDKGGNGAPLAIEKTLYEGQALMVQVIKDPIGTKGARLSTQV
SIAGRTLVYLPQDPHIGISQRIEGEIDREALRARVQGLVPADERGGFIVRTIAEEASDEE
LGNDIAYLRKIWATIRQSATTLPAPSLLYQDLNLAQRVLRDFVSDLTGQIQVDSRENYQK
LVEFAEEYTPAVLPRLSHYTGERPIFDLYNIDAEIERALSRRVDLKSGGYLMIDQTEAMT
TIDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLGGIIIIDFIDMENAEHRDAVL
SELKRALSRDRTRITVNGFSQLGLVEMTRKRTRESLAHVLCEQCPVCQGKGQVKTPRTVC
YDVLREIMRESRQFNPREFRILASQEVIDLFLEEESQHLAMLGDFIGKPISLQVESTFHQ
EQYDIILM
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagacatcctcgtcaacatcacgccgcaagaaacccgggtagccatcgtgcaa
caggccgccgtgcaggaactgcacgtcgagcgcacgctgacgcgcgggctggtcggcaac
atctacctcggcaaggtcgtgcgcgtgctgcccggcatgcagtcggccttcatcgacatc
ggcctggaacgcgcagccttcctgcacgtggccgacatctggcatccgcgcgatggcgac
aagggcggcaacggcgcgccgctggccatcgaaaagacgctctacgaagggcaggcgctg
atggtgcaggtgatcaaggatcccatcggcaccaagggcgcacgcctgtccacccaggtc
agcatcgccggccgcaccctggtctacctgccgcaggacccgcacatcggtatttcccag
cgcatcgagggcgagatcgaccgcgaagccctgcgcgcgcgcgtgcagggcctggtgcct
gccgacgagcgcggtggcttcatcgtgcgcaccatcgcggaggaagccagcgacgaagaa
ctcggcaacgacatcgcctacctgcgcaagatctgggcgacgatccggcagagcgccacc
accctgccggcgcccagcctgctgtaccaggacctgaacctggcccagcgcgtgctgcgc
gacttcgtcagcgacctcaccggccagatccaagtcgactcgcgcgaaaactaccagaag
ctggtcgagttcgccgaggaatacacgccggccgtgctgcctcggctgtcgcactacacc
ggcgaacggcccatcttcgacctctacaacatcgatgcggagatcgagcgcgcgctgtcg
cgccgggtcgacctgaagtcgggcggctacctgatgatcgaccagaccgaggcgatgaca
acgatcgacgtcaacaccggcggctacgtcggcgcgcgcaacttcgacgacacgatcttc
aagaccaacctcgaggccgcccacaccatcgcgcgccagctgcgcctgcgcaacctgggc
ggcatcatcatcatcgacttcatcgacatggagaacgcggagcatcgcgatgccgtgctc
tccgaactcaaacgtgcgctgtcgcgcgaccgcacccgcatcaccgtcaacggcttctcc
cagctcggcctggtggaaatgacgcgcaagcgcacgcgcgaatcgctggcgcacgtgctg
tgcgagcaatgcccggtctgccagggcaagggccaggtcaagacgccgcgcacggtctgc
tacgacgtactgcgcgagatcatgcgcgagtcgcgccagttcaacccgcgcgaattccgc
atcctggcctcgcaggaagtgatcgacctcttcctcgaagaggaaagccagcaccttgcc
atgctgggcgacttcatcggcaagccgatctcgctgcaggtggagtccaccttccaccag
gagcagtacgacatcatcctgatgtag
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