Cupriavidus sp. USMAA2-4: BKK79_08655
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Entry
BKK79_08655 CDS
T05072
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cuu
Cupriavidus sp. USMAA2-4
Pathway
cuu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cuu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BKK79_08655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cuu03400
]
BKK79_08655
Enzymes [BR:
cuu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BKK79_08655
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BKK79_08655
DNA repair and recombination proteins [BR:
cuu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BKK79_08655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DUF5817
Motif
Other DBs
NCBI-ProteinID:
AOY91859
UniProt:
A0A1D9GW55
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All DBs
Position
1:complement(1980945..1981832)
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AA seq
295 aa
AA seq
DB search
MPELPEVEVTRRGLLPHVTGRRIAAVTVRHRGLRWPVEPGLEARLAGRVIRRIERRGKYL
LLECADPAGNAGMDTQATGWLIIHLGMTGTLRVLPEAPPPGPHDHVDLDLEAAEAEGVPP
APVVLRFRDPRRFGAVLWSHLPESELAAHPLLRGLGIEPFDAGFDGAWLHRHTRGRSAAI
KTVLLAGDIVVGVGNIYASESLFRAGIHPTTPAGRLSRARCERLAAAVREILAEAIARGG
STLRDFVGSDGSSGYFQLDCCVYDRAGKPCRTCGTPIRQIVQGQRSTFYCPRCQH
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagttgcccgaggtcgaagtgacccggcgcggtctgctgccccatgtgacgggg
aggcgcatcgctgccgtgacggtgcgccaccgcggcctgcgctggccggtggagcccggg
ctggaagcgaggctggcgggccgcgtgatccgccgcatcgagcggcgcggcaagtacctg
ctgctcgagtgtgccgacccggccgggaacgcgggcatggatacgcaggccacgggctgg
ctcatcatccacctcggcatgaccggcaccttgcgtgtcctgcccgaggccccgccgccg
gggccgcacgatcacgtcgacctggacctggaggctgccgaggccgaaggcgtgccgccg
gcgcccgtggtgctgcgcttccgcgatccgcggcgcttcggcgcggtgctgtggagccac
ttgccggagtcggaactggctgcccatccgctgctgcgcgggctcggcatcgagcccttc
gatgccggcttcgatggcgcgtggctgcatcggcatacgcgcgggcgcagcgccgccatc
aagaccgtcctgctggccggggacatcgtggtcggcgtcggcaatatctacgcctccgag
agcctgttccgcgcgggcatccatccgaccacgccggccggccggctgagccgcgcgcgt
tgcgagcggctcgccgcggcggtgcgcgagatcctggccgaggccatcgcgcgcggcggc
agcaccttgcgtgacttcgtcggcagcgacggctccagcggctacttccagctcgactgc
tgcgtttacgatcgcgccggcaagccgtgccggacctgcggcaccccgatccggcagatc
gtgcagggccagcgctccaccttctactgtccacgctgccagcattga
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