Cupriavidus sp. USMAA2-4: BKK79_11560
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Entry
BKK79_11560 CDS
T05072
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cuu
Cupriavidus sp. USMAA2-4
Pathway
cuu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cuu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BKK79_11560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cuu03400
]
BKK79_11560
Enzymes [BR:
cuu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BKK79_11560
DNA repair and recombination proteins [BR:
cuu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BKK79_11560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
ADDB_N
Zn_ribbon_6
HypA
AAA_19
Bac_DnaA
Motif
Other DBs
NCBI-ProteinID:
AOY94154
UniProt:
A0A1D9H2Z2
LinkDB
All DBs
Position
1:2643892..2646177
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AA seq
761 aa
AA seq
DB search
MAAVFPAAEPGIVRVALDTPAADSFDYLGSGAATPGAIVSVPFGRRELVGVVLGRADSSE
VPAERLRPVRAQVDWLPPLDANWMALAVFAARYYHRCLGEVMLPALPPALRESAGWAGLA
QRAQGRFYRLLPGAGQALLDSVPARARSVMALAQALTAAADDAGEDGGPGLSASEARALC
SAAPARLAQWEEAGWIEAETRARPLLATEPGRAPSEPPPLHAEQRQAVEAIGAAQGFSPF
LLHGVTGSGKTEVYLHAIAQALAAGPHAQVLMLVPEINLTPQLQARVAARFPGEPLAVLH
SGLAEQERSLQWLAAHRGEARIVLGTRMAIMASLPRLALILVDEEHDTSYKQQDGLRYSA
RDLAVWRAKQLGIPVVLGSATPSMESWWRAEQGAYRKLVLRERAQADAVLPAVRLVDLNH
ERQRQRPLYEGLSVPLLDAVQARLERGEQSLLFLNRRGYAPVLACDACGWLSGCPRCSAY
LVLHRPERRLRCHHCGLEAPVPHHCPDCGNMDIAPLGRGTQRVEEALAARFPQARIARID
ADSTRRKGSAQAMFDDVHAGEVDILVGTQMVAKGHDFQRVTLVGIVHPDAAMFSHDFRAA
EHLFASLMQVAGRAGRAGLAGEVLIQTRYPDAPALQALARHDYDGFAGAQLRERRQAGLP
PFAYQALLTAEHGQLDRALAFLQAARRQAEQGVPAPEVQLHDPVPMSMVRVANRERAQML
VESHSRAALQRFISAWVLTFDGIGEAAKGVRWQLEVDPLRI
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
ctggctgcggtgtttcccgccgcggagcccggcatcgtgcgcgttgccctggatacgccg
gcggccgacagcttcgactacctcggcagcggcgctgccacccccggcgcgatcgtcagc
gtgcccttcggccgccgcgagctggtcggcgtggtgttgggccgtgccgacagcagcgag
gtgccggcagagcggctgcgcccggtgagggcgcaggtggactggctgcctccgctcgat
gcgaactggatggcgctggccgtctttgcggctcgctactaccatcgctgcctcggtgaa
gtgatgctgccggcccttcctcccgctttgcgcgagagcgccggctgggcggggctcgcg
cagcgggcgcagggcaggttctatcgcttgctgcccggggccggccaggccctgctcgac
agcgtgccggcgcgtgcgcgcagcgtgatggcattggcgcaggcgctgacggccgcggcc
gacgatgccggcgaggatggcgggccgggcctgtccgccagcgaggcgcgcgccttgtgc
agcgccgcgccggcccgcctcgcgcaatgggaagaggctggatggatcgaggccgagacc
cgtgcccgcccgctgctggcaaccgagcccgggcgggcgccctcggagccgccgccgcta
catgcggagcagcggcaggcggtcgaggcgatcggcgcggcgcagggcttttccccgttc
ctcctgcacggcgtcaccggcagcggcaagaccgaggtctacctgcacgccatcgcgcag
gcgctggccgccggcccgcacgcccaggtgctgatgctggtacccgagatcaacctgacg
ccgcagctgcaggcgcgcgtggccgcgcgctttccgggcgagccgctggcggtgctgcac
agcggcctggccgagcaggagcgcagcctgcaatggctggccgcgcatcgcggcgaggcg
cgtatcgtgctgggcacgcgcatggccatcatggcctccctgccgcgcctggcgctgatc
ctggtcgatgaggagcacgatacctcctacaagcagcaggacggcctgcgctactcggcg
cgggacctcgcggtctggcgcgccaagcagctcggcattccggtggtgctgggttcggcc
acgccttcgatggaatcctggtggcgcgccgagcaaggtgcctaccgcaagctggtgctg
cgcgagcgcgcccaggccgacgccgtgctgccagcggtgcggctggtcgacctgaaccac
gagcgccagcgccagcggccgctctacgaggggttgtcggtgccgctgctggacgcggtg
caggcgcgcctcgagcgcggcgagcagagcctgctcttcctcaaccggcgcggctatgcg
ccggtgctggcctgcgatgcctgcggctggctgtccggctgtccgcgctgttccgcctac
ctggtgctgcaccggcccgagcggcggctgcgctgtcaccattgcgggctggaggcgccg
gtgccgcaccattgtcccgactgcggcaatatggacatcgctccgctggggcgcggcacg
cagcgggtcgaagaggccctggcggcgcgttttccacaggcccgcatcgcccgcatcgat
gccgactcgacacgccgcaagggcagcgcccaggccatgttcgacgatgtccacgccggc
gaggtcgacatcctggtcggcacgcagatggtggccaaggggcatgacttccagcgcgtc
acgctggtcggcatcgtccacccggacgccgccatgttcagccacgacttccgcgccgcc
gagcacctgttcgcctcgctgatgcaggtggccgggcgcgccggacgggccggcctggcg
ggcgaggtactgatccagacgcgctaccccgacgctccggctttgcaggcgctggcccgc
catgactatgatggattcgctggcgcccaattgcgcgaacgccgccaggcgggcctgccg
cccttcgcctaccaggccttgctgacggccgagcacggccagctggaccgggcgctggcc
ttcctgcaggccgcgcgccggcaggcggagcagggcgtgccggcgcccgaggtgcaactg
cacgatccggtgccgatgtcgatggtgcgggtcgccaaccgcgaacgtgcccagatgctg
gtggaaagccactcgcgcgcggcgctgcaaaggtttatcagcgcatgggtgctgactttc
gatggcatcggcgaggccgcgaagggcgtgcgctggcagttggaggtggatccgctgcgg
atctga
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