Cupriavidus sp. USMAA2-4: BKK79_12485
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Entry
BKK79_12485 CDS
T05072
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cuu
Cupriavidus sp. USMAA2-4
Pathway
cuu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cuu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BKK79_12485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cuu03021
]
BKK79_12485
03400 DNA repair and recombination proteins [BR:
cuu03400
]
BKK79_12485
Enzymes [BR:
cuu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BKK79_12485
Transcription machinery [BR:
cuu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BKK79_12485
DNA repair and recombination proteins [BR:
cuu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BKK79_12485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AOY92503
UniProt:
A0A1D9GY03
LinkDB
All DBs
Position
1:2836422..2837402
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AA seq
326 aa
AA seq
DB search
MQTALLKPKIIAVEPLGDHHAKVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VVHEYSTIDGVQEDVVNLLLNLKGVVFKLHNRDEVTVSLRKEGEGVVTAADIELPHDVEI
INPGHVIAHLSAGGKLDMQIKVEQGRGYVPGNVRKFGDEASKVIGRIVLDASFSPVRRVS
YAVESARVEQRTDLDKLVMNIETDGVISPEEAIRQSARILVDQLSVFAALEGTESSAEAA
SSRAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNE
IKEVLASRGLTLGMKLENWPPAGLEK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacagcactcctcaagccaaaaatcatcgccgtcgagccgcttggcgatcatcac
gccaaggtcgtgatggagccgttcgagcgtggctacgggcatacgctcggtaacgccctg
cgtcgcgtgctgctgtcctcgatggtcggctatgcgccgacggaagtgacgatcgctggg
gtggtccacgagtattccaccattgatggcgtgcaggaagacgtggtcaacctgctgctg
aacctcaagggtgtggtcttcaagctgcacaaccgcgatgaagtcacggtttcgctgcgc
aaggaaggcgaaggcgtggtgacggctgccgatatcgagctgccgcacgacgtcgagatc
atcaacccgggccacgtgatcgcccacctgtctgccggcggcaagctggacatgcagatc
aaggtcgaacagggccgtggctacgtgcccggcaacgtgcgcaagttcggcgacgaagcg
agcaaggtcatcggccgcatcgtgctggatgcctcgttctcgccggtgcgccgcgtgtcg
tacgcggtcgagtcggcccgcgtggaacagcgtaccgacctcgacaagctggtgatgaac
atcgaaaccgacggcgtgatctcgcccgaggaagcgatccgccagtcggcccgcatcctg
gtcgaccagctgtccgtgttcgctgccctggaaggcaccgagtcgtcggcggaagccgcc
tcgagccgcgcgccgcagatcgatccgatcctgctgcgcccggtcgacgacctggagctg
acggtgcgctcggccaactgcctgaaggccgagaacatctactatatcggcgacctgatc
cagcgtaccgagaacgagctgctgaagaccccgaacctgggtcgcaagtcgctcaacgaa
atcaaggaagtccttgcctcgcgcggcctgaccctcggcatgaagctcgagaactggccg
cccgcaggcctggagaagtaa
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