Cupriavidus sp. USMAA2-4: BKK79_16615
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Entry
BKK79_16615 CDS
T05072
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cuu
Cupriavidus sp. USMAA2-4
Pathway
cuu03030
DNA replication
cuu03410
Base excision repair
cuu03420
Nucleotide excision repair
cuu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cuu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BKK79_16615
03410 Base excision repair
BKK79_16615
03420 Nucleotide excision repair
BKK79_16615
03440 Homologous recombination
BKK79_16615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cuu03032
]
BKK79_16615
03400 DNA repair and recombination proteins [BR:
cuu03400
]
BKK79_16615
Enzymes [BR:
cuu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BKK79_16615
DNA replication proteins [BR:
cuu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BKK79_16615
DNA repair and recombination proteins [BR:
cuu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BKK79_16615
NER (nucleotide excision repair)
GGR (global genome repair) factors
BKK79_16615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AOY93243
UniProt:
A0A1D9H019
LinkDB
All DBs
Position
1:3732657..3735479
Genome browser
AA seq
940 aa
AA seq
DB search
MSDSPKTLLLVDGSSYLYRAYHALPDLRNGEGLPTGAIYGMINMLRKLRNDYPAEYSACV
FDAKGKTFRDDLYPAYKEHRPSMPEDLARQIEPIHEAVRALGWPIVMVEGVEADDVIGTL
AREASAQGVRTVVSTGDKDLAQLVNGEVTLVNTMSGEVLDPAGVQAKFGVPPERIVDYLS
LIGDAVDNVPGVPKVGPKTAVKWLTEHGSLDAVMAGADGIKGVVGENLRKTLDWLPMART
LVTVKTDCDLGAAVSDFHALKDVGEDKDKLVAFFSRYGFKTWLRELTGESLPSLRAQAAK
GAGARAPQAQGGLFDSAPAATPADPVPAPDAPPAETRYETVTTEAALQAWLDRLAEGALV
AVDTETTSLDPMQARLVGISLSLVPGEACYIPVGHCGPDVAGIEQHGQLTREFVLERLRG
WLEDPARPKLGQNIKYDAHVFANHGVTLRGIVHDTMLQSYVLASHRNHGMDSLAERLLGI
KTITYEEVCGKGASQIGFDQIDLARATEYAAEDADVTLRLHRAMFPQLQAVPGLEHVYRH
IEMPVSVVLQKIERNGVLIDAQRLAEQSAQLGQRMLELEQAAYDAAGQPFNLGSPKQIGE
ILFGQMKLPVVKKTASGAPSTDEEVLQKLAEDYPLPKLLLDYRGLAKLKSTYTDKLPKMV
NPATGRVHTSYGQATAVTGRLASTDPNLQNIPVRTEEGRRIREAFIAPPGRVIVSADYSQ
IELRIMAHISGDENLLGAFARGEDIHRATAAEIFGVEREAVSSEQRRYAKVINFGLIYGM
SAFGLAGNLGIEREAAKHYIDRYFTRYPGVARYMEDTRQAAREQGYVETVFGRRLWLPDI
NGGSGPRRQAAERAAINAPMQGTAADLIKLSMIAVQDWLERDRLQTLQIMQVHDELVLEV
PEAELELVKRRLPELMCGVAELRVPLVAEVGSGANWEEAH
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatagtccaaaaacactcttgctcgtcgatggttcgagctatttgtatcgcgcg
tatcacgctctgccggacctgaggaatggcgaggggctgcccacaggggcaatctacggc
atgatcaacatgctgcgcaagctgcgcaacgattacccggcagagtatagcgcctgcgtg
ttcgacgccaagggcaagaccttccgcgacgatctctatccggcctacaaggagcaccgg
ccctcgatgcccgaggacctggcgcggcagatcgaacccatccacgaagcggtgcgcgcg
ctgggctggcccatcgtgatggtggagggcgtggaggccgacgacgtgatcggcacgctc
gcgcgcgaggcctccgcccagggcgtgcgcacggtcgtctcgaccggcgacaaggacctg
gcgcagctggtcaacggcgaggtcacgctggtcaacacgatgagcggcgaagtgctcgat
cccgccggcgtgcaggccaagttcggcgtgccgccggagcgcatcgtcgactacctgtcg
ctgatcggcgatgctgtcgacaacgtgccgggcgtgcccaaggtgggccccaagaccgcg
gtcaagtggctgaccgaacatggctcgctcgatgcggtgatggccggcgccgacggtatc
aagggcgtggtcggcgagaacctgcgcaagaccctggactggctgccgatggcgcgcacg
ctggtcacggtgaagaccgattgcgacctcggtgcggctgtgtccgatttccacgccctc
aaggacgtgggcgaggacaaggacaagctggtcgcgttcttctcccgctatggcttcaag
acctggctgcgcgaactgaccggcgagagcctgcccagcctgcgcgcgcaggccgccaag
ggcgccggcgcgcgcgcgccgcaggcacagggcggcctgttcgacagcgccccggccgcg
acgccggccgacccggtgccggcgccggatgcgccgcccgccgagacccgctacgagacc
gtgaccaccgaggcggcgctgcaggcctggctcgaccggctcgccgagggcgcgctggtg
gccgtcgataccgagaccacctcgctcgacccgatgcaggcccggctggttggcatctcg
ctgtcgctggtgccgggcgaggcctgctacatcccggtgggccactgcggtcccgacgtg
gccggcatcgagcagcacggccagctcacgcgcgaattcgtgctggagcgcctgcgcggc
tggctggaagatccggcccgccccaagctcggccagaacatcaagtacgacgcgcatgtg
ttcgccaaccatggtgtcacgctgcgcggcatcgtccacgacacgatgctgcagagctac
gtgctggcctctcaccgcaaccacggcatggacagcctggccgagcgcctgctcggcatc
aagaccatcacctacgaggaggtctgcggcaagggcgcgagccagatcggcttcgaccag
atcgacctggcgcgcgccaccgagtacgcggccgaggatgccgacgtgacgctgcgcctg
caccgcgccatgttcccgcagctgcaggccgtgcccggcctcgaacacgtgtaccggcat
atcgagatgccggtctcggtggtgctgcagaagatcgagcgcaacggcgtgctgatcgac
gcgcagcgcctggccgagcagagcgcgcagctcggccagcgcatgctggagctggagcag
gccgcctacgatgcggccggccagccgttcaacctcggctcgcccaagcagatcggcgag
atcctgttcggccaaatgaagctgccggtggtgaagaagaccgccagcggcgcgccctcg
accgacgaagaggtgctgcagaagctggccgaggactatccgctgcccaagctgctgctg
gactaccgcggcctggccaagctgaagtccacctacaccgacaagctgcccaagatggtg
aacccggccaccggccgcgtgcacaccagctacgggcaggccaccgcggtgaccggacgg
ctggcctcgaccgacccgaacctgcagaacatcccggtgcgcaccgaggagggccggcgc
atccgcgaggccttcatcgcgccgccgggccgcgtcatcgtctcggccgactactcgcag
atcgagctgcgcatcatggcccatatctcgggcgacgagaacctgctcggcgccttcgcg
cgcggcgaggacatccaccgcgccaccgccgccgagatcttcggcgtggagcgcgaggcg
gtcagcagcgagcagcgccgctacgccaaggtgatcaacttcggcctgatctacggcatg
agcgccttcggcctggccggcaacctcggcatcgagcgcgaggcggccaagcactacatc
gaccgctacttcacgcgctatcccggcgtggcgcgctacatggaggacacccggcaggcc
gcgcgcgagcagggctatgtcgagaccgtgttcggccggcgcctgtggctgccggacatc
aatggcggcagcggcccgcgccgccaggccgccgaacgtgccgccatcaacgcgccgatg
cagggcacggcggcggacctgatcaagctgtcgatgatcgcggtgcaggactggctcgag
cgcgaccggctgcagacgctgcagatcatgcaggtgcacgacgaactggtgctcgaggtg
cccgaggccgagctggaactggtcaagcgccggctgcccgagctgatgtgcggcgtggcc
gagctgcgcgtgcccctggtggcggaagtcggcagcggcgccaactgggaagaggcgcac
tga
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