Cupriavidus sp. USMAA2-4: BKK79_17420
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Entry
BKK79_17420 CDS
T05072
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
cuu
Cupriavidus sp. USMAA2-4
Pathway
cuu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cuu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BKK79_17420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cuu03400
]
BKK79_17420
DNA repair and recombination proteins [BR:
cuu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BKK79_17420
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BKK79_17420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
AOY94255
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All DBs
Position
1:3911583..3912467
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AA seq
294 aa
AA seq
DB search
MPELAGGGQGPRGGRRGDPVAEDAAEVLGVQDVRGASVAEQRAMMDRALRIMPARSEVRV
NNQPGFVLHSWPYRETSLILDVFTRDHGRMALVAKGAKRAHSALRPVLQHFQPIALSWSG
RGEVKTLTKAEWVGGMLPLAADALLSGFYLNELLLRFCPREDGHAALFRHYMATLTRLGH
GEPAGLVLRSFERTLLQETGFAVAFDRCTSTGERVRPEVDYVYHPERGVRPAHASDPSSW
PVIGGQSLLDMAQDDYGRAQTAAQSRALMRFLLHYYLQGEPLRTRQILIDLHYL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagctggcgggcggcgggcagggcccgcgcggcggccgccgcggcgatccggtg
gccgaggatgcggcggaggtcctgggcgtccaggacgtgcgcggcgcgagcgtcgccgag
cagcgcgcgatgatggaccgcgccctgcgcatcatgccggcgcgcagcgaggtgcgcgtc
aacaaccagccgggcttcgtgctgcattcgtggccctaccgcgagaccagcctgatcctc
gacgtgttcacgcgggaccatggccgcatggccctggtggccaagggcgccaagcgcgcg
cattccgcactgcgtcctgtgctgcagcatttccagccgatcgcgctgtcctggagcgga
aggggcgaggtcaagaccctgaccaaggcggagtgggtgggcggcatgctgccgcttgcc
gccgacgcgctgctgtccggcttctacctgaacgaactgctgctgcgcttctgcccgcgc
gaagatggccacgcggcgctgttccgccactacatggccaccttgacgcggctcggccac
ggtgagcccgctggcctggttttgcgcagcttcgagcgcacgttgctgcaggaaaccggc
tttgccgtggccttcgaccgttgtaccagcaccggcgagcgggtgcggcccgaggtggac
tatgtctaccatccggagcgaggcgtgcggccggcgcacgcgagcgatccgtcgtcgtgg
ccggtgatcggcggccagtccctgctcgacatggcccaggatgactatggcagggcgcag
acggcggcgcagagccgcgcgctgatgcgtttcctgctgcactattacctgcagggcgaa
ccgctcaggacgcgccagatcctgatcgacctgcactatctctga
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