Cupriavidus sp. USMAA2-4: BKK79_17785
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Entry
BKK79_17785 CDS
T05072
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cuu
Cupriavidus sp. USMAA2-4
Pathway
cuu03030
DNA replication
cuu03430
Mismatch repair
cuu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cuu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BKK79_17785
03430 Mismatch repair
BKK79_17785
03440 Homologous recombination
BKK79_17785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cuu03032
]
BKK79_17785
03400 DNA repair and recombination proteins [BR:
cuu03400
]
BKK79_17785
Enzymes [BR:
cuu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BKK79_17785
DNA replication proteins [BR:
cuu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BKK79_17785
DNA repair and recombination proteins [BR:
cuu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BKK79_17785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AOY94264
LinkDB
All DBs
Position
1:complement(3989584..3990294)
Genome browser
AA seq
236 aa
AA seq
DB search
MRQIVLDTETTGLNAATGDRLIEIGCVEMVNRRLTGRNLHFYVNPEREIDEGAIAVHGLT
LEFLSDKPRFAEVVEPIREFVRDAELIIHNASFDLGFLDMEFQLLGLPPFREHVGGVIDT
LKEARQMFPGKRNSLDALCDRLGVSNAHRTLHGALLDAELLAEVYLAMTRGQDSLVIDAL
DDGDGPGHAVASADLSALDLPVLRASEEEVAAHAAVLKELDKASGGKTVWQEVPAA
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgcgacagatcgttctcgataccgaaaccaccggcctgaatgccgccaccggcgaccgc
ctgattgaaatcggctgtgtggagatggtcaaccggcgcctgacggggcgcaatctgcat
ttctacgtcaaccccgagcgcgagatcgacgaaggcgcgatcgccgtgcacgggctgacg
ctcgagttcctctcggacaagccgcgcttcgccgaggtggtcgagcccatccgcgagttc
gtgcgcgatgccgagctgatcatccacaacgcgagcttcgacctgggcttcctcgacatg
gaattccagctgctcggcctgccgccattccgcgagcacgtcggcggcgtgatcgatacg
ctcaaggaagcgcgccagatgttccccggcaagcgcaattcgctcgatgcgctgtgcgat
cggctgggcgtcagcaacgcgcaccggacgctgcacggcgccttgctggatgcggaactg
ctggccgaggtctacctcgccatgacgcgcggccaggactccctggtcatcgatgccctc
gacgatggcgacggaccgggtcacgcggtggcctcggcggacctgtccgcgctcgacctg
cccgtgctgcgcgccagcgaggaagaggtggccgcccatgcagcagtgctgaaggaactc
gacaaagcgagcggcggcaagaccgtctggcaggaggtgccggcggcctga
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