Cupriavidus sp. USMAA2-4: BKK79_18070
Help
Entry
BKK79_18070 CDS
T05072
Name
(GenBank) recombinase RecB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
cuu
Cupriavidus sp. USMAA2-4
Brite
KEGG Orthology (KO) [BR:
cuu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cuu03400
]
BKK79_18070
Enzymes [BR:
cuu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BKK79_18070
DNA repair and recombination proteins [BR:
cuu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BKK79_18070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AOY93490
UniProt:
A0A1D9H1F7
LinkDB
All DBs
Position
1:4052853..4055792
Genome browser
AA seq
979 aa
AA seq
DB search
MISLHFRPGPDFLAQAGASVWHFLDHCGQAAGAHVLVPTAAQIPGVRAALDAAARAAGAP
RLLPRVLTLGHWLLDLPPEAQPVRSAAARLLAVQQALRGQEWLRRAFGAQTEGAAWGLAQ
TLLSICDELSARWLEDEAVRDDDDILGDDRAQLLQGALERTYAHLSDRFLGEEARIVLAF
WQALSGPDDPLPARRRALRNLAEHVPGPVVWLGPTPPQPIEAAFLREAGELVPVMEIGYD
WSGRALASGEEGITGWYETLLALWPEAVLVPRAPRADGEDEAADEAVGVPATGDAGLPWR
MPGELPPLPPQRPNLRVIGSARFEDEATAAAEQLVAWLNAGRRQVALVAHDRVVARRTRA
LLARAGAPVRDETGWKLSTTRAAAALMRWFDLLSGEGDTAALLDLLKSPFCLPEFPSRGA
AIAVLERQIRRDAISGGWHRLTQLFAGAARHDPATGDDLAEAELAARQGARALVAALSGE
AAQWPRGRAQRPVAHWLERLDAMLDALGMRAALAGDDAGQQLLDALARLDELPQDEAGAQ
ASLDLGEFRAMLSALLEAVAYKEPSASSAARITILPLNGARMRRFEGVVIVGCDDGQLPS
SAAELMFFSNQMRRELGLEDREVRFAQQARDLAEVLLNNDEVVMTWQRLGGRGEPKHVSG
WIERLSACCRRAGEPIEAVAAAPVHETRALPSGMPAPAAPALVPPRWSAQAYNMLRRCPY
QFFAGRMLGLSGLDAVSDELEKRDIGDLLHRVLLRYHTELQDSGGQPRDAQGRLALLRQC
TDAVFGPLVAEDGNAIGYYRRWCEVQPSYIEWQAGREAEGWRWRAGELDAGIDLAMPDGE
PLRLNGRIDRLDQHRDGGHAVLDYKTQSAARLRKKVGDVEEDCQLPFYGLLRADAVSGSW
VSLEGVQDGAAAAQREVALPDFDAAVAWLERQLRHDVVRLRGGAPLPAIGDTAACTWCEA
RGLCRKGFWESTALPEAIR
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgatttccctgcatttccgccccggtcccgacttcctggcgcaggccggcgcctcggta
tggcacttcctcgaccattgcggacaggccgccggcgcccacgtgctggtgccgacggcc
gcgcagattcctggcgtgagggccgcgctggacgccgcggcgcgggccgcgggcgcgccg
cggctgctgccgcgcgtgctgacgctcgggcactggctgctcgacctgccgccggaggcc
cagcccgtgcgcagcgcggccgcgcggctgctcgccgtacagcaggcattgcgcggccag
gaatggttgcggcgcgccttcggcgcgcagaccgagggggcggcctgggggctggcgcag
acattgctgtccatctgcgacgaattgagcgcgcgctggctcgaagacgaagcggtgcgc
gacgatgacgacatcctgggcgacgaccgcgcgcaattgctgcagggcgcgctggaacgg
acctacgcgcacctgagcgatcgtttcctgggggaggaggcgcgcatcgtgctggccttc
tggcaggcgctgtcggggccggacgatccgctgccggcgcgccggcgggcgctgcgcaac
ctggccgagcacgtgcccggcccggtggtgtggctggggccgacaccgccgcagccgatc
gaggcggcgttcctgcgcgaggcgggcgagctggtgccggtgatggagatcggctacgac
tggtcggggcgcgcgctggcgtccggggaggagggcatcaccggctggtacgagaccctg
ctggcactctggcccgaagccgtgctggtgccgcgcgcaccgcgtgccgatggggaagac
gaggcagcggacgaggcggtcggcgtcccggccaccggggacgcgggcctgccctggcgc
atgccgggcgagcttcccccattgccgccgcaacgtcccaacctgcgcgtgatcggcagc
gcgcgcttcgaagacgaagccacggccgcggcggagcaactggtggcctggctcaatgcc
ggtcggcgccaggtggccctggtggcgcacgatcgcgtggtggcacgccgcacgcgcgcg
ctgctggcgcgcgccggcgcgccggtgcgcgacgagaccggatggaaattgtccaccacg
cgcgccgccgcagcgctgatgcgctggttcgacctgctttccggcgaaggggataccgca
gccctgctcgacctgctcaagagcccgttctgcctgccggagtttccatcgcgaggcgcg
gccatcgcggtgctggagcggcagatccggcgcgatgccatctcgggaggatggcaccgg
cttacccagctgttcgccggcgcggcgcggcacgacccggctaccggcgacgaccttgcc
gaagcagagctggcggcgcgccagggcgcacgcgccctggttgccgcgctctcgggcgag
gcggcgcagtggccgcgcggccgcgcccagcggccggtcgcgcactggctggagcggctg
gacgccatgctcgacgcgcttggcatgcgggcagcgctggctggcgacgacgccggccag
cagttgctcgacgccctggcgcgcctggacgaactgccgcaggacgaggcgggcgcgcaa
gcctcgctggacctgggcgagttccgcgcaatgctgtccgcgctgctggaggcagtcgcc
tacaaggagccctcggcgagcagcgcggcacggatcaccatcctgccgttgaacggtgcg
cgcatgcggcgtttcgagggggtggtgatcgtcggctgcgacgatggccagctgccgtcg
agcgcggccgagctgatgttcttctccaaccagatgcggcgcgagcttgggctggaggac
cgcgaggtgcgcttcgcccagcaggcacgcgacctggccgaagtgctgctcaacaacgac
gaggtcgtgatgacctggcagcgcctgggcgggcgcggcgaaccgaagcatgtgtcgggc
tggatcgagcggctctcggcctgctgccggcgcgcaggcgagccgatcgaagccgttgcc
gcggccccggtccacgagacgcgtgccttgccgtcgggcatgccggcgccggcggcgccg
gcgctggtgccgccgcgctggagtgcccaggcctacaacatgctgcggcgctgtccctat
cagttctttgccggccgcatgctcgggctgtcggggctcgacgcggtcagcgacgaactg
gagaagcgcgatatcggcgatctgctgcaccgcgtcctgctgcgctaccacaccgagctg
caggacagcggcgggcagccgcgcgacgcgcaaggccggctcgcgctgctgcggcagtgc
accgatgccgtgttcgggccgctggtggccgaggacggcaatgcgatcggctactaccgg
cgctggtgcgaggtgcagccctcctatatcgaatggcaggccggccgcgaggccgagggc
tggcggtggcgcgccggtgaactcgatgccggcatcgacctggccatgccggatggtgag
ccgctgcgcctgaacggacgcatcgaccgcctagaccagcaccgggatggcggccatgcc
gtgctcgactacaagacgcagagcgcggcgcgcctgcgcaagaaggtgggggacgtggaa
gaagactgccagttgccgttctacggcctgctgcgtgccgatgcggtcagcggtagctgg
gtgtcgctggagggcgtgcaggacggggccgcggccgcccagcgcgaagtggcgctgccc
gatttcgacgccgccgtcgcctggctggagcggcagttgcgccacgacgtggtgcgcctg
cgcggcggcgcgccgctgcccgccatcggggatacggccgcctgcacctggtgcgaggcg
cgcggcctttgccgcaagggcttctgggagtcgaccgcgctgccggaggcgatccgatga
DBGET
integrated database retrieval system
