Cupriavidus sp. USMAA2-4: BKK79_18180
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Entry
BKK79_18180 CDS
T05072
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
cuu
Cupriavidus sp. USMAA2-4
Brite
KEGG Orthology (KO) [BR:
cuu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cuu03021
]
BKK79_18180
Transcription machinery [BR:
cuu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BKK79_18180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
HTH_20
HTH_Crp_2
KORA
ToxA_barrel
Motif
Other DBs
NCBI-ProteinID:
AOY93508
UniProt:
A0A1D9H118
LinkDB
All DBs
Position
1:4080269..4081432
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AA seq
387 aa
AA seq
DB search
MPRQKTVSSGTASRTRRPKQPEVKAGVAAADPQAEPFGQDVDAAAELIPLTEEPIATGGG
AVLGAGDMLGDDAEASLHDDDADRDDEEEEEEEAEPAEHDDFRSVLHTELAADTVQHYLN
RISIKPLLSAPEELHFSTLAKDGDFSARQVMIERNLRLVVSIAKGYLNRGVPLLDLIEEG
NLGLMHAIEKFDPSRGFRFSTYATWWIRQSIERAIMNQARTVRLPVHVIRELNQVLRAKR
HLEKSGTDGRDASLEDIAHLLGKTADEVQDVLALNEHTTSLDTPFDLDPGSSLLDFLSDE
HNAAPDQEVAHRELENLMKLWLARLSEKHRYVVERRFGLNHIEPATLEELAEEMGLTRER
VRQIQQEALVKLKRHFASQGVRKDAVL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgccacgccagaaaactgtctcatccggaaccgccagcaggacccgtcgtcccaagcag
ccggaagtgaaggctggcgtggcggcggctgatcctcaggccgagcctttcggccaggat
gtggacgcggcggccgaactgattcccctgaccgaagagcccatcgccaccggcggtggc
gccgtgctcggtgccggcgacatgctcggcgacgatgccgaggcctccctccacgacgac
gacgcggatcgggacgacgaagaagaggaagaagaggaggccgagcccgccgagcacgac
gatttccgctcggtgctccataccgaactggcggccgataccgtccagcactacctgaat
cgcatcagcatcaagccgctgctgtcggcgcccgaggaactgcatttctcgacgctggcc
aaggacggcgacttctccgcgcgccaggtgatgatcgagcgcaacctgcgcctggtggtc
agcatcgccaagggctacctgaaccgcggcgtgccgctgctcgacctgatcgaggaaggc
aacctcggcctgatgcacgcgatcgagaagttcgacccgtcgcgcggcttccgcttctcc
acctatgccacctggtggatccgccagagcatcgagcgcgcgatcatgaaccaggcgcgc
acggtgcgcctgccggtgcacgtgatccgcgagctgaaccaggtgctgcgtgccaagcgc
catctcgaaaagagcggcaccgacggacgcgatgcgagtctcgaggatatcgcccacctg
ctgggcaagacggccgacgaggtgcaggacgtgctggcgctcaacgagcacaccacgtcg
ctggataccccgttcgacctggaccctggctcgagcctgctcgacttcctttccgatgag
cacaatgccgcgccggaccaggaggtcgcgcaccgcgagctggaaaacctgatgaagctg
tggcttgcacggctttctgaaaaacaccgctacgtggtggaacgccgtttcggcctgaac
catatcgagccggccacactggaggagctggccgaggagatggggctgacgcgcgagcgc
gtgcgccagatccagcaggaggcgctggtcaagctcaagcggcatttcgcctcgcaaggc
gtgcgcaaggacgctgttctgtga
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