Cupriavidus sp. USMAA2-4: BKK79_25790
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Entry
BKK79_25790 CDS
T05072
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
cuu
Cupriavidus sp. USMAA2-4
Brite
KEGG Orthology (KO) [BR:
cuu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cuu03016
]
BKK79_25790
Enzymes [BR:
cuu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
BKK79_25790
Transfer RNA biogenesis [BR:
cuu03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
BKK79_25790
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Corona_NS2A
Motif
Other DBs
NCBI-ProteinID:
AOY97106
UniProt:
A0A1D9HB50
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All DBs
Position
2:1290981..1291565
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AA seq
194 aa
AA seq
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MRLFVAVDVPPTLAAALLATLPRDAAVRPAPVAQVHLTLCFLGACAAPAVAQVEHALAGV
TSPAFTLVPRDGGRFRGRQGSVLWIGVADPAPLRALHEAVRSALREAGLSLPRERFLPHL
TVARCRPGAPEPLLQAWLAARRGAAWPAVEVGRFLLYASELSPGGARHHVLRAFPLAPSG
QLAEPERQPQADQG
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctgttcgtcgccgtcgacgtgccgccgacactggcggcagcgctgctggcgacg
ctgccgcgcgacgccgccgtccgcccggcgccggtggcgcaggtccatctgaccttgtgc
tttctcggtgcttgtgcggcgccggcggtcgcgcaggtggagcacgcgctggccggtgtg
acgtcgcccgccttcacgctggtgccgcgcgatggcggccgcttccgcggccgccagggc
agtgtgctctggatcggtgtggcggatccggcgccgctgcgggcgctgcacgaggcggtg
cgctccgcgctgcgcgaggcggggctgtccttgccgcgcgagcgcttcctgccgcacctg
accgtcgcccgctgccggcccggcgcgccggaaccgctgctgcaggcgtggctggccgcg
cggcgcggggctgcctggccggccgtcgaggtcggccgcttcctgctctatgcgagcgaa
ctgtctccgggcggcgcgcgccaccatgtcttgcgggccttcccgctggcgccttcaggc
cagcttgctgaacccgagcgccagccccaggctgaccagggctga
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