Cupriavidus sp. USMAA2-4: BKK79_37295
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Entry
BKK79_37295 CDS
T05072
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cuu
Cupriavidus sp. USMAA2-4
Pathway
cuu03420
Nucleotide excision repair
cuu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cuu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BKK79_37295
03430 Mismatch repair
BKK79_37295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cuu03400
]
BKK79_37295
Enzymes [BR:
cuu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BKK79_37295
DNA repair and recombination proteins [BR:
cuu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BKK79_37295
MMR (mismatch excision repair)
Other MMR factors
BKK79_37295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_30
HDA2-3
AAA_12
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AOY97832
UniProt:
A0A1D9HDB7
LinkDB
All DBs
Position
unnamed1:261568..263379
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AA seq
603 aa
AA seq
DB search
MLHGLNPEQLQAAQCLEHCLVVACPGSGKTKTLAAKAAFLLSQGARVAAVTFTRDAALEL
RGRTVALAGEGSNDRLLVGTFHSIDMLMAFPKARTPFGTSILSRMRSPFGSRNWDIVREG
ERRGYVRRALAEAGIKLDMDEASRLIEDAKANNRESALEGSHRTFIATYQQILSRNGQID
FQDILLKTNAALADGSLTPLAVEYLLIDEYQDTDEVQYEWIKMHAAAGCRLTCVGDDDQS
IYGFRRALGFACMERLVKDLKADTILLGVNYRCHGEILGAAGKMVQSNRGRIDKILRANK
GLGGAVEWERFGDFELESEACLVGVEDALRDQATIAVLARSNRRLDLIEGLLVARDLPYR
RADGESVLDKPEVALFGSLIETVAQCTPRAIDQVLGWAGVFEADLRQIRQLFGNTVRIGA
KQDFERTDLSSDAIASWTDFAKRHAAWSDLNEKGLYRIMLHGMKEWLTLHAKDEKSKRMV
EIAASIFSPSGISPRERLEGLRLASRQRRTREAATGQPVSLMTAHSSKGLEFDRVWILGA
EDEAWPSKNGSLEEERRLMYVAMTRARERLTVSAAGQRPTSPFVAESGIPRAPEGKYRSR
AGG
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
ctgctgcatggtctgaaccccgagcagctgcaagccgcgcaatgccttgagcattgcctg
gtcgttgcctgcccgggatcaggcaagacaaagacgttggccgccaaggccgctttcctc
ctgtcccaaggcgctcgggtggcagcggtcaccttcacacgcgacgcagcgctggaactg
cgggggcgcacggtcgccctcgcgggcgagggctccaacgaccgactgctcgtcggcacg
ttccattcgatcgacatgctgatggcgttccccaaagcgcgaacaccgtttggcacgtcg
attctctcccgaatgcgctcccctttcggcagtcgaaactgggatattgtccgcgagggc
gagcggcgaggctacgtccggcgggcccttgctgaggcgggcatcaagctcgacatggac
gaggccagccgactcatcgaggacgcgaaggcaaacaaccgggagagcgcgctcgagggt
agccaccggacgttcattgcgacctaccagcagatcctctcgcgcaatggtcagatcgac
ttccaggacatcctcctcaagacgaacgccgctttggctgacggtagtctcacgccactc
gccgtcgagtatctgctgatcgacgagtatcaggacaccgacgaagttcagtatgagtgg
atcaagatgcacgccgccgcgggctgccgcctcacctgtgtcggcgatgacgaccagtcg
atctacggattccgccgagctcttggcttcgcctgcatggaacggctggtcaaggacctg
aaggccgacacaattctccttggagtgaactatcgctgccatggggaaatcctgggtgcc
gccggcaagatggtccagtccaatcggggacgtatcgacaagattctccgcgcgaacaag
ggcctcggcggcgcggtcgagtgggagcgtttcggcgacttcgagctggagtctgaagcc
tgcctggtcggcgtcgaggatgccttgcgagaccaggcgacgatcgcggtgctcgcccgc
agcaaccgccgccttgacctgatcgaggggttgctcgtcgcccgcgatctcccctatcgt
cgagccgacggcgaatccgtgctcgacaagcccgaggtcgctctcttcggctcgcttatc
gagaccgtggcgcagtgcacgccgcgcgcgatcgaccaggtcctggggtgggcgggggta
ttcgaggccgatctgcggcagattcgccagcttttcggaaacacggttcgaatcggggcg
aagcaggacttcgagcgcaccgacctgtcgtccgacgccatcgcatcctggacggacttc
gccaagcgccatgcggcttggtccgacttgaatgagaaaggactctaccgaatcatgctg
catggcatgaaggaatggctcacgctccatgcgaaggacgaaaaatcgaagcgaatggtc
gagatcgcggcatcgatcttttccccgtctgggatcagcccccgcgagcgcctggaggga
ttgcggctcgcaagccggcagcgccgcacacgagaagcggctaccgggcagccggtgtcg
ctgatgacggcccactcatccaaaggccttgagttcgaccgcgtctggatcctcggcgcg
gaggacgaggcctggccgtcaaagaacggtagtctggaagaggaacggcgcctgatgtat
gtcgctatgacccgcgcgcgggagcggctaaccgtgagcgccgcaggccagcggccgaca
agcccattcgtcgccgaatcgggcatcccgcgggcgccggagggcaagtaccgaagccgc
gccggcggctag
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