Corynebacterium ureicelerivorans: CUREI_04105
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Entry
CUREI_04105 CDS
T03241
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cuv
Corynebacterium ureicelerivorans
Pathway
cuv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cuv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CUREI_04105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cuv03400
]
CUREI_04105
Enzymes [BR:
cuv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CUREI_04105
DNA repair and recombination proteins [BR:
cuv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
CUREI_04105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
UvrB_inter
TRCF
Helicase_C
CarD_TRCF_RID
ResIII
Cas3-like_C_2
AAA_22
Glyoxalase
RecG_dom3_C
AAA_16
MFD_D3
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AIL96585
UniProt:
A0A077HJU1
LinkDB
All DBs
Position
780933..784565
Genome browser
AA seq
1210 aa
AA seq
DB search
MTESTPPVLGGLLTAALTDSKLKGLVTHVGEDALHITGIDQTRSWAAGAIARETPLLLVT
ATGHEAEDLAAELKAILGEEKVAQFPAYETLPHERLSPAADIVGRRSKVLWDMPRVVVAA
ARAVCQPVLPAVEPVRIEVDQEHDFAALTEKLVHFAYNHVDMVAARGEFATRGGIIDVFP
TTALNPVRIEFWGDEVTDIRSFAVADQRTIEEVRSVELHPARQLLIDDAVAAKADELARK
FPSNPTLTSLLTRIAEKQPADGMEALIPALTQEQYAVLPELMPSGSVVLVTNPEKVRARI
ADLEATDREFLEAGWEAAAMGAEGPVAVEGLDVSASSYRSYESLEISARKAGNAWWTFAP
PGMFAADDAATLPLEFEAAPAPKGDPKAIEQFYATLKLHIGRNHGKVAFVAPAKGTIDRM
ADRLREHGISARVATPGLEPVDGAVTLYQALSHAGLVFGGPNLVVVTETDVTGNRVGDIA
GAKRRAPRRRNRVDPLALQPGDFVVHDTHGIGKFVKMAERTVKAGDEDSRREYIVLEYQP
AKRGQPGDQLWVPMESLDLLSKYTGGEKPSLSKMGGSDWKSTKRKARAAVREIAGELVEL
YAKRQAAPGHAFAPDTPWQHEMEDAFPFVETEDQLTAIEAVKADMEKPTPMDRVIVGDVG
FGKTEVAVRAAFKAVQDGKQVAVLVPTTLLAQQHFTTFNQRMDGFGVTVRELSRFTTAAD
TKKIMAGLADGSVDVVIGTHRLLQTGVQWKNLGLIIVDEEQRFGVEHKEHIKALKSHVDV
LTMTATPIPRTLEMSLTGIREMTSITTAPEDRHPVLTYVGPQEDKQVAAAIRRELLRDGQ
VFYIHNKVSDIEKTARQLRELVPEARIVVAHGQMSEQVLEQTVQGFWNRDYDVMVCTTIV
ETGLDIANANTLIVENAQNMGLSQLHQLRGRVGRSRERAYAYFLYPKDKTLTETSYDRLA
TIAQNNDLGAGMAVAQKDLEMRGAGNVLGAEQSGHIAGVGFDMYVRLVSEAVETFKGLMS
GEPVDATDKGPKEIRVDLPVDAHIPENYINSERLRLEVYRRLAEARDDDALTAAGDDMVD
RFGALPTEVEHLMAVARLRNQARAVGVADILTQGARIKLHPVELPDSKQVRLKRLYPGAN
YRAAAKTLQVPMPREGGNKRAINAPNLRDMELLQWVADFMSEMLDAPKVSVAGSTVAEEK
PKKKVFSVSE
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaagcacccctcccgttctcggcggattgcttaccgctgcgctgacagattcc
aagctcaaggggcttgtcacccacgtgggcgaggatgcgctgcacatcactggcattgac
cagacccgctcgtgggccgcgggtgccatcgcgcgcgagaccccgctgctgttggtcacg
gcaaccggccacgaggcggaagatctcgccgcggagctcaaggcgatccttggcgaggaa
aaggtggcgcagttcccggcgtacgagacgttgccgcacgagcgactctccccggccgcg
gacattgtgggccgccgctcgaaggtgctgtgggacatgccgcgcgtggtggtggccgcg
gcgcgtgcggtgtgccagccggtgctgcctgcggtggagcccgtgcgcattgaggtggac
caggagcacgacttcgcggccctgaccgagaagctcgtccactttgcgtacaaccatgtg
gacatggtcgcggcgcgcggcgaatttgccactcgcggcggcatcattgacgtcttccca
acgaccgcgcttaaccccgtgcgcatcgagttctggggcgacgaagtgacggacatccgc
tccttcgccgttgcggaccagcgcaccatcgaggaggtgcgctccgtcgagctgcacccc
gcaaggcagctgcttatcgacgacgccgtggcagccaaagccgacgaactcgcgcgaaag
ttcccctccaacccgacgctgacgtcgctgctcacccgcatcgcggagaaacagccggcg
gacggcatggaggcgctcatcccggcgctgacacaggagcagtacgccgtgctcccggaa
ctcatgccgtccggctcggtggtgctggtgacgaacccggagaaggtccgcgcccgcatc
gccgacttggaggccacggaccgcgagtttctcgaggccggttgggaggccgccgcgatg
ggcgcggagggtcccgttgcggtggaggggctggacgtctccgcgtcgtcgtaccgctcc
tacgagtcgctcgaaatctccgcgcgaaaggcaggcaacgcctggtggaccttcgccccg
ccgggcatgttcgccgcagacgacgccgcgacgctgcccctggagttcgaagcggcgccc
gcaccgaagggcgaccccaaggcgatcgagcagttctacgccacgctgaagctgcacatc
gggcgaaaccacggcaaggtggcgttcgtggcgccggcaaagggcacgatcgaccgcatg
gcggatcgcctgcgggaacacggcatctccgcgcgcgtggccacgccgggcctcgagccc
gtggacggggcggtcaccctctaccaggcgttgtcccacgctggcctcgtgttcggcggc
ccaaaccttgtggtggtcacggaaaccgacgtcacgggcaaccgcgtgggcgacatcgcg
ggtgctaagcgacgagctccgcgccgccgcaaccgcgtcgatccgctggcgctgcagccg
ggggatttcgtggtgcacgacacccacggcatcggcaaattcgtgaaaatggccgagcgc
actgtcaaagccggcgacgaggattctcgccgcgagtacatcgtgctggagtaccagccc
gccaaacgcggccagcccggcgatcaactgtgggtccccatggagtcgttggatctgctg
agcaagtacaccgggggcgagaagcccagcttaagcaaaatgggcggctcggactggaag
tccaccaagcgcaaggcgcgcgcggcggtgcgcgagatcgccggtgagttggtggagctg
tacgccaagcgccaggctgccccaggccacgcgttcgcaccggacaccccgtggcagcac
gagatggaagacgccttcccgttcgtggagacggaagaccagctcaccgctatcgaagcc
gtgaaggcggacatggaaaagcccaccccgatggaccgggtaattgtcggcgacgtcggc
ttcggtaaaaccgaggttgcggtgcgcgccgcgttcaaggcagtccaggacggcaagcag
gtcgctgtgctggtgcccaccacgcttttggcccagcaacacttcaccaccttcaaccaa
cgtatggacggcttcggcgtgaccgtgcgggagctttcccgcttcaccactgctgcggac
acgaagaagatcatggctggtcttgcagacggctcggtcgacgtggtcatcggcacccac
cgcctcctgcagacgggcgtgcagtggaagaacctggggctgatcatcgtcgacgaggag
cagcgtttcggcgtcgagcacaaggagcacatcaaggcgctcaaatcccacgtggacgtg
ctgacaatgaccgcgacgccgatcccgcgcacgctcgagatgtcgttgaccggcatccgc
gagatgacctcgatcaccaccgcgccggaagaccgccacccggtgctgacgtatgtgggc
ccgcaggaggacaagcaggtcgccgcagcaatccggcgcgagctgcttcgcgacggccaa
gtcttctacatccacaacaaggtctccgacattgaaaagaccgcccgccagctgcgcgag
ctcgtgccagaggcgcgcatcgtcgtcgcccacgggcagatgagcgagcaggtgctggaa
caaaccgtgcaggggttctggaaccgggactacgacgtgatggtgtgcaccaccatcgtg
gaaaccggcctggacatcgccaatgccaacaccttgattgtggaaaacgcgcagaacatg
ggcttgagccagctgcaccagctgcgcggacgcgtggggcgctcccgcgagcgcgcgtac
gcgtacttcttgtaccccaaggacaagacgctcacagagacctcctacgaccgccttgcc
accatcgcccagaacaacgacctgggcgctggtatggccgtggcgcagaaggacctggaa
atgcgcggcgcgggcaacgtgctcggcgcggagcagtccggtcacatcgcgggcgtcggc
ttcgacatgtacgtccggctggtcagcgaagccgtggagaccttcaaggggctcatgagc
ggtgagcccgtcgacgccacagacaagggcccgaaggaaatccgcgtggacctgcccgtc
gacgcccacatcccagagaactacatcaactccgagcgtctgcgcctggaggtttaccgt
aggctcgccgaggcgcgcgacgacgatgccctcaccgccgccggcgacgacatggtggat
cgcttcggtgccctgcccaccgaggttgagcacctgatggcagttgcgcggctgcgtaac
caagcgcgtgcggtgggcgtggccgacatcctcacccagggcgcacgcatcaagcttcac
ccggttgagctaccggactccaagcaggtgcgactgaagcgcctgtacccgggtgcgaac
taccgggccgcagcgaagaccctgcaggtgcccatgccgcgcgagggcgggaacaagcgc
gcgatcaacgcacccaacttgcgagacatggagctgctgcagtgggtggcggatttcatg
tccgagatgctggatgcgccgaaggtctcagtggctggatcgacggtggcggaggagaaa
ccgaaaaagaaagtgttctcggtcagcgagtaa
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