Campylobacter upsaliensis: CUP3940_0091
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Entry
CUP3940_0091 CDS
T06758
Symbol
truD
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cux
Campylobacter upsaliensis
Brite
KEGG Orthology (KO) [BR:
cux00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cux03016
]
CUP3940_0091 (truD)
Enzymes [BR:
cux01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CUP3940_0091 (truD)
Transfer RNA biogenesis [BR:
cux03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CUP3940_0091 (truD)
Prokaryotic type
CUP3940_0091 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
QKF87079
LinkDB
All DBs
Position
90176..91297
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AA seq
373 aa
AA seq
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MNLKDENTTFKPLRVLRHSKINAYFSKNSEDFVVREKPLYEFSGEGEHLIIQICKKDLST
NEALRILSEFSGAKMRDFGYAGLKDKQGCTFQHISLPKKFEAKLSHFSHPKMKIMQSFIH
NNKLRIGHLKGNSFFIRLKKVLAGDALKLEQALENLNKMGFANYFGYQRFGKFKDNYKEG
LAILQGKKMKNVKMKDFLISAFQSELFNRYLSKRVEISHFSKEFSLSELGEIYHISKEEA
KSLKTQKQFFKLLKNEVLGHYPFGKCFLCENLENELVRFMARDISAMGLLVGVRAFECGE
GFAKNLEQELFKEGLEFRDQMQGSRRFMWGYLKDLKYHYDAQKAHFSFEFFLEKGSYATV
ILDELLQNEGLES
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaaggacgagaacaccacttttaagcccttgcgtgtgttaagacatagtaaa
attaatgcgtattttagtaaaaatagcgaagattttgtcgtaagggaaaaaccgctttat
gagtttagtggggagggggagcatttgattatccaaatttgcaaaaaggaccttagcaca
aatgaggctttgcgaattttaagcgaatttagtggggctaaaatgcgtgattttggctat
gcaggacttaaagataagcaaggatgcacctttcagcacatctctttacctaaaaaattt
gaagcaaaacttagtcatttttctcaccctaaaatgaaaattatgcaaagttttatccat
aataataagctaagaatagggcatttaaagggaaattccttttttatcaggcttaaaaaa
gtgctagctggtgatgcacttaaactagaacaagccttagaaaatcttaacaaaatgggc
tttgcaaattattttggttatcagcgttttggcaaatttaaagataattataaagaggga
cttgccattttacaaggtaaaaagatgaaaaatgtcaaaatgaaagattttttaatctcc
gcttttcaaagtgagctttttaaccgctatcttagcaaaagagtggaaatttcgcatttt
tctaaggaatttagccttagtgagctaggtgaaatttatcacatttctaaagaagaggca
aaaagcttaaaaacacaaaagcagttttttaaacttttaaaaaacgaggttttgggacat
tatccttttggaaagtgttttttgtgtgaaaatttagaaaatgagcttgtaagatttatg
gcaagagatattagcgctatggggcttttagtgggagttagggcgtttgagtgtggggag
ggctttgcgaaaaatttagaacaagaactttttaaagaaggcttggaatttagggatcaa
atgcaaggctcaaggcgttttatgtgggggtatttaaaagatttaaaatatcactatgac
gcacaaaaggcacattttagctttgaatttttcttagaaaaaggctcttatgcaactgtg
attttggacgagcttttgcaaaatgagggtttagaaagctaa
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