Campylobacter upsaliensis: CUP3940_0514
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Entry
CUP3940_0514 CDS
T06758
Symbol
uvrB
Name
(GenBank) UvrABC nucleotide excision repair complex, subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
cux
Campylobacter upsaliensis
Pathway
cux03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cux00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CUP3940_0514 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cux03400
]
CUP3940_0514 (uvrB)
DNA repair and recombination proteins [BR:
cux03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CUP3940_0514 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CUP3940_0514 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_3rd
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
UB2H
Kinesin
AAA_30
SWI2_SNF2
PH_SENP67
Focal_AT
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
QKF87486
LinkDB
All DBs
Position
503766..505736
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AA seq
656 aa
AA seq
DB search
MFQLQSEFKPSFDQEEAIKGIVKSIKAGHKYQTLLGVTGSGKTFTMANVIKELAMPTLIM
SHNKSLCAQLYSEFKGFFPHNHIEYFISYYDYYQPEAYIPRTDVFIEKDSSTNEDLERLR
LSATASLLSYEDVVCIASVSANYGLGNPSEYEGMVLIFEENMQISQKALLKKLVDMGYKR
NDTFFDRADFRVSGDTVDIYPAYYEDEVVRLEFFGDDLERIYHYNILENKKTKDLKRFIL
YPTSQFSVGEARLKEAIKEIKEELNSRLAYFENENKLVEYQRLKQRVEFDLEMLQSTGMC
KGVENYARHLTGLKEGQTPYTLFDYYAIKKRPFLVIVDESHVSLPQFRGMFAGDRSRKQT
LVDYGFRLPSALDNRPLMFDEFIHKNCQFLFVSATPAPLELDLSGKNIFHQIMRPTGLLD
PIIELKDSHNQVEILYDEAKKVIARNERILVTVLTKKLAEELSRYYLELGLRVKYMHSDI
DAIERNELIRGLRSGEFDMLIGINLLREGLDLPEVSLIAIMDADKEGFLRSTTSLIQTMG
RAARNVNGKVLLFCQKITKSMQEAIDTTSERRKLQEEYNKKHKITPTSVKRNLEESLKNE
DLGEIYRKGAKFEKMPASERAKFVKELRKEMLEAAKNLEFEKAAALRDEIKKFKDL
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaactgcaaagcgaatttaagccaagttttgaccaagaagaagccattaagggt
atagtaaaaagcattaaagctgggcataaatatcaaaccttactcggcgttacgggtagt
ggtaagacctttacaatggcaaatgttattaaagaacttgctatgcctactttaattatg
agtcataataaaagcctttgtgcccagctttatagtgaatttaaaggcttttttccgcat
aatcatattgaatattttatctcctattatgattattatcagccagaagcatatatccca
cgcactgatgtttttatcgaaaaagacagctcgactaatgaagacttagagcgtttaagg
ctaagtgctaccgcttcacttttaagctatgaagatgtagtttgtatcgcttctgtttcg
gcaaattatggcttgggtaatcctagcgaatatgagggtatggttttgattttcgaggaa
aatatgcaaatttcacaaaaagccctccttaaaaagcttgtcgatatgggttataaacgc
aatgatactttttttgatcgtgctgattttcgtgtgagtggtgatactgtggatatttac
ccagcttattatgaagatgaagtggtgaggcttgagttttttggtgatgatttggagaga
atttatcattataatattttagaaaataaaaaaacaaaggatttaaaacgctttatttta
taccctacaagtcaatttagcgtgggcgaggcaaggcttaaagaagcgataaaagagata
aaagaggagctaaattctcgccttgcttattttgaaaatgaaaacaagcttgtggagtat
caacgccttaagcaaagggtagaatttgaccttgagatgctacaaagcacaggtatgtgt
aaaggcgtggaaaattatgcgaggcatttaacaggacttaaagaggggcaaacgccttac
acactttttgattattatgccattaaaaaacgcccctttttggtcatcgttgatgaaagt
catgtgtccttgccccagtttcgcggaatgtttgctggggatagaagtagaaagcaaact
ttggtcgattatggctttcgtctgccctccgcccttgataatcgtcccttaatgtttgat
gaatttatccataaaaattgtcaatttcttttcgtctccgccactccagcacccttagag
cttgatttaagtggaaaaaacatttttcatcaaattatgcgtcctacgggcttgcttgat
cctattatcgaattaaaagatagtcataatcaagtggaaattctttacgatgaagctaaa
aaagtcatagcaagaaatgagcgaattttagttaccgtgctgactaaaaagctagccgaa
gagctaagtcgctattatttagagcttggacttagggtcaaatatatgcactcagacatt
gatgcgatcgagcgtaatgagcttatccgtgggcttagaagtggcgaatttgatatgctt
ataggtattaatttattaagagaggggcttgacctgcccgaagtttcacttatagctata
atggacgctgataaagagggctttttaagaagcacgacaagcctgatacaaacgatggga
agggctgctagaaatgttaatggtaaggttttgcttttttgccaaaaaattacaaagtca
atgcaagaagccatagatactacaagtgaacgccgcaaactccaagaagaatataataaa
aaacataaaatcacccccacttcagtgaagagaaatttggaagaaagtcttaaaaatgaa
gatttgggagaaatttatagaaaaggtgcaaaatttgaaaaaatgccagcaagcgaaagg
gcgaaatttgtgaaagaattgcgtaaagaaatgcttgaagcggctaaaaatttggaattt
gaaaaggctgccgctttaagggacgaaattaaaaaatttaaagatttataa
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