Campylobacter upsaliensis: CUP3940_0670
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Entry
CUP3940_0670 CDS
T06758
Name
(GenBank) radical SAM methylthiotransferase, MiaB/RimO family
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cux
Campylobacter upsaliensis
Brite
KEGG Orthology (KO) [BR:
cux00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cux03009
]
CUP3940_0670
Enzymes [BR:
cux01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CUP3940_0670
Ribosome biogenesis [BR:
cux03009
]
Prokaryotic type
ribosomal protein modification factors
CUP3940_0670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QKF87634
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Position
669549..670859
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AA seq
436 aa
AA seq
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MPNLYLHSLGCNKNLVDSEIMLGRLENYTLCDEPKRADVLIVNTCGFIESAKKESIEAIL
NLHKERKKNSLLVVTGCLMQRYKEELMRALPEVDLFTGVGDFEKIDTLILKKQNLFSNST
YLQEEGVKRVITGSNSHAFIKISEGCNQSCAFCAIPHFKGRLKSREISSIIKELESLISR
GYKDFSFIAQDSSSYLFDKGQKDGLLRLIEEVEKLKGIRAARILYLYPSTLSEEVVRKII
ASKVFVNYFDMPLQHISDKMLKVMKRGSKKEQILKLLKMMRGAKDSFLRTGFIVGHPGES
EEDFRELCEFVEGFDFDRISVFGYSKEEDTLAFEMEQVPKKVINARLKILEKIVAKSLEK
SFKKEVGQKRLVVCEGESSEGEFFIAGKDLRWDREIDGEILINESECGILERGQIYECEI
IQALDVKLIAKALKLA
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatttatatcttcactcactagggtgtaataaaaatttagtcgatagtgaaatt
atgctaggacgccttgaaaattatactttgtgtgatgagcctaaaagagctgatgttttg
attgtcaatacttgcggttttatagagagtgcaaaaaaggagagcatagaagcgatttta
aatttgcataaagagcgtaagaaaaattccttgcttgtcgttacgggctgcttgatgcaa
cgctacaaagaagagctgatgagggctttgcctgaggtggatttatttacaggggttggc
gattttgaaaagatcgatacgctcattttaaaaaaacaaaatttattttcaaactcgact
tatttgcaagaagagggagttaaaagagttattacaggctcaaattcacacgcttttata
aagattagcgagggttgcaatcaaagctgtgccttttgtgctataccgcattttaagggg
cgcctcaaatcgcgtgaaatttcaagtatcataaaagagcttgagagccttatatctagg
ggttataaggacttttctttcatcgcgcaggatagctcgtcttatctttttgataagggg
caaaaggacggacttttgcgtttgattgaggaagtggaaaaattaaagggcataagagca
gcgcgcattttatatctttaccctagcaccttaagcgaagaagtggtgcgtaagatcatc
gcttctaaggtctttgtgaattattttgatatgcctttgcaacacattagcgacaaaatg
ctaaaagtgatgaaaaggggcagtaaaaaggagcaaatcttaaagcttttaaagatgatg
agaggggctaaggatagctttttacgcacaggttttatcgtggggcatccaggggagagt
gaggaggattttagggagctttgtgaatttgtggagggctttgactttgatagaattagc
gtatttggctattctaaagaagaagatactctagcctttgaaatggaacaagtccctaaa
aaagtcatcaatgcccgtcttaaaattttagaaaaaattgtcgcaaaaagccttgaaaaa
agctttaaaaaagaagtcggtcaaaaacgcttagtcgtttgtgagggtgaaagtagtgag
ggggaattttttatcgctgggaaagatttgcgttgggatagggagattgatggcgaaatt
cttattaatgaaagcgaatgtggcattttggaaagaggtcaaatttatgaatgtgagatt
atacaagcacttgatgtaaaactcatagctaaggctttaaaacttgcctaa
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