Campylobacter upsaliensis: CUP3940_0779
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Entry
CUP3940_0779 CDS
T06758
Symbol
metS
Name
(GenBank) methionyl-tRNA synthetase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
cux
Campylobacter upsaliensis
Pathway
cux00450
Selenocompound metabolism
cux00970
Aminoacyl-tRNA biosynthesis
cux01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cux00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
CUP3940_0779 (metS)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CUP3940_0779 (metS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cux01007
]
CUP3940_0779 (metS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cux03016
]
CUP3940_0779 (metS)
Enzymes [BR:
cux01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
CUP3940_0779 (metS)
Amino acid related enzymes [BR:
cux01007
]
Aminoacyl-tRNA synthetase
Class I (U)
CUP3940_0779 (metS)
Transfer RNA biogenesis [BR:
cux03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CUP3940_0779 (metS)
Prokaryotic type
Other AARSs
CUP3940_0779 (metS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA_bind
tRNA-synt_1e
Anticodon_3
Anticodon_1
HVO_0758
tRNA-synt_1f
Zn_ribbon_6
Zn_ribbon_8
DUF5816
Motif
Other DBs
NCBI-ProteinID:
QKF87733
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All DBs
Position
complement(771123..773003)
Genome browser
AA seq
626 aa
AA seq
DB search
MRYITTPIYYVNDVPHLGHAYTTIIADTLARFYRLSGHKTLFLTGTDEHGQKIEQAAKNK
NHSPKEYADKISLEFKKLWDEFEISYDIYARTTDERHIKFVKQVFLKMWEKGDIYKGEYE
GYYCVSCESFFTQSQLINQKCCPDCGKETRLLKEESYFFRLSKYEKDILKWYESEPIVPK
NKKAELVNFIENGLKDLSITRTSFEWGIKIPSNLNDDKHIIYVWLDALFIYISSLELDEK
SENLGFLPAFVHLVGKDILRFHAIYFPAFLMSADLPLPKHIAAHGWWTRDGEKMSKSKGN
ALYPKIIADAYGLEAFRYFLLREVPFGNDGDFSETMLINRINAELSNEFGNLLNRIIGMS
LKYSNGNILQDEVLNFYKAELKEANLHLQNALEFIENFQFNRYLEELFKALSVANLSISK
YEPWNLIKANETSKANALVSLCANILARVSLLLHPALPKSTQKVAKALSFDITLQNYQKL
ILNDELLNFKANACEALFPKIEKPLLNSVKEELKKDENPKIKIEDFAKIELKVALVKQCE
NVKGSEKLLKFILELDNKETRQVLSGIAKFYKPEELIGKQVCLISNLKKAKIFGYESDGM
ILSAKSGDKLVLISPNKLVENGSLIG
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgcgttatattaccacaccgatttattatgtcaatgatgtccctcatttaggacacgct
tatacgaccattattgccgatactttagcacgcttttatagacttagcggacacaaaacg
ctttttttaacaggcaccgatgaacacggacaaaaaatcgaacaagccgctaaaaataaa
aatcacagccctaaagaatacgccgataaaatcagtcttgaatttaaaaaactctgggac
gaatttgagataagctatgatatttacgcacgcaccacagatgaaaggcatattaaattt
gtcaaacaagtttttttgaaaatgtgggaaaaaggcgacatttataagggtgaatatgag
ggctattactgcgtttcttgtgaaagtttttttacgcaatctcaattaatcaatcaaaaa
tgctgtcctgattgtggaaaagaaacgcgacttttaaaggaagaaagctatttcttcagg
ctttcaaaatatgaaaaagacattttaaaatggtatgaaagcgaacccatagtgcctaaa
aataaaaaagcagaacttgtcaattttatagaaaatgggcttaaagacctctccattaca
cgcacaagctttgagtgggggattaaaattccgtcaaatttaaacgatgataagcatatc
atttatgtatggcttgatgctttatttatttacattagctcactagaacttgatgaaaaa
agcgaaaatttaggctttttacccgcttttgtgcatttagtgggtaaagatatcttgcgt
tttcacgcgatttattttcctgcttttttaatgagcgctgatttacctttaccaaaacac
atcgccgcacacggctggtggactagggacggagaaaaaatgagcaagtcaaaaggtaat
gccctctatccaaaaatcatagcagatgcctatggtttagaagcttttcgctatttttta
ttaagagaagtgccttttggaaatgatggggactttagcgaaacaatgcttataaaccgc
attaatgccgagcttagtaatgaatttggcaatttattaaaccgcattataggaatgagt
cttaaatactcaaatggcaatattttgcaagatgaagttttaaatttttataaggcagag
ttaaaggaagcaaatttacatcttcaaaatgccctagaattcatagaaaattttcaattt
aatcgctatttagaagagctttttaaggctttgagtgtagcaaatttaagcataagcaaa
tatgagccctggaatttaataaaagcaaatgaaacaagcaaggcaaatgctctagtttct
ttatgtgcgaatattttagctagggttagcttactcttgcaccctgccctgcctaaaagc
acacaaaaggtagctaaagctcttagtttcgacatcactttgcaaaattatcaaaaactc
attttaaacgatgagcttttaaattttaaagcaaatgcttgcgaggctttatttccaaag
atagaaaagccacttttaaattccgtcaaagaagaattaaaaaaagatgaaaaccctaaa
attaaaattgaagattttgccaaaatagagcttaaagtcgctctagtgaaacaatgtgaa
aatgtaaaaggcagcgaaaagctacttaaatttatacttgaacttgataataaagaaaca
agacaagtcctttcaggcatagcgaaattttacaaaccagaagagcttataggcaagcaa
gtatgtctcatatctaatcttaaaaaagcaaaaatttttggctatgaaagtgatggtatg
atactttcagccaaaagtggcgataaacttgtgctaattagtcccaataaacttgtagaa
aatggctctttaataggctaa
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