Campylobacter upsaliensis: CUP3940_1239
Help
Entry
CUP3940_1239 CDS
T06758
Symbol
valS
Name
(GenBank) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
cux
Campylobacter upsaliensis
Pathway
cux00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cux00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CUP3940_1239 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cux01007
]
CUP3940_1239 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cux03016
]
CUP3940_1239 (valS)
Enzymes [BR:
cux01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
CUP3940_1239 (valS)
Amino acid related enzymes [BR:
cux01007
]
Aminoacyl-tRNA synthetase
Class I (U)
CUP3940_1239 (valS)
Transfer RNA biogenesis [BR:
cux03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CUP3940_1239 (valS)
Prokaryotic type
CUP3940_1239 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1e
tRNA-synt_1_2
tRNA-synt_1f
tRNA-synt_1b
DUF1664
DUF3375
Motif
Other DBs
NCBI-ProteinID:
QKF88183
LinkDB
All DBs
Position
1234363..1236975
Genome browser
AA seq
870 aa
AA seq
DB search
MYDKNLEKKYYELCEKRGYFEIDSNKSIQKEGKNFCIMMPPPNVTGVLHIGHALTFTLQD
IITRYKRMDGYKTLYQPGLDHAGIATQNVVEKQLLAQGITKEELGREKFIEKVWEWKEQS
GGKILEQMRTLGITPAWSRLRFTMDDGLANAVKKAFVKLYDEKLIVRGNYMINWCTHDGA
LSDIEVEYKENKGKLYHIKYFLKDSEEFLVVATTRPETFFGDTAVMVHPDDERYAKFVGK
EVVLPLSKKAIKIIADESVEKDFGTGVVKVTPAHDMNDYEVGLRHHLEFLSVFDEKGILN
EHCLEFMGLERLEAREKIVQKLENLGFIEKIEEHHNQVGYCYRCNNIVEPYISKQWFVKK
EIAQKSIEKVALNKTQFYPSHWVNSFNAWMRDLRDWCISRQLWWGHQIPVYYCECGCEWA
SEDTPKSCPKCGSTNFHQDPDVLDTWFSSGLWAMSTLGWGNKDWGKDQFWFEKDLREFYP
NSLLITGFDILFFWVARMMFQSTNALEELPFKHIYLHALVKDEQGRKMSKSLGNVIDPNE
SIKTYSADILRFTLALLAVQGRDIKLSEDKLLQVRNFTNKIYNATNYLLLNENKFEDLEN
ITIQSELAKFIDAKFQECLKQVRENLENYRFNDAANYLYRFFWDDFCDWGIELSKAQKSS
VKELGSIFKEALKALHPFMPFISEYTYHKLSGSELENSASIMISAYPNLGNKDEKIERIF
SLLIESIISIRRAKSLIELGNAKIEKAYIKLNNSAMQSEIEKYQHFITLLAKCENIEFIS
EKLNNAICDVSENLEINIKLDNIDLSAIIARLENQKAKLEKEIAKINAMLSNEKFLSKAP
KDIILQNQNALNNLKEQFEKVQMELKNLKG
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgtatgataaaaatttagaaaaaaaatactatgagctttgtgaaaaacgcggatatttt
gagatagattcaaacaaaagcatacaaaaagagggtaaaaatttctgcattatgatgcct
ccacctaatgtaacaggcgttttgcacattgggcatgctcttacttttaccctgcaagat
attatcacgcgttataaaagaatggacggctacaaaacgctttatcagcccggactagac
cacgcaggtatcgctacacaaaatgtcgtagaaaagcaacttttggcacaaggcattaca
aaagaagagcttggaagagaaaaatttatagaaaaagtgtgggaatggaaggagcaaagt
gggggcaaaattttagaacaaatgcggacacttggtataactccagcgtggagtcgtttg
cgttttactatggatgatggcttggcaaatgccgttaaaaaagcctttgtaaagctttat
gatgaaaagcttatcgttcgaggcaattatatgatcaattggtgcactcacgatggtgct
ttaagcgatatagaagtcgaatataaagaaaacaaaggcaaactttatcacattaaatat
tttttaaaagatagtgaagaatttcttgtcgttgctacaactcgtcctgaaacttttttc
ggcgatacggcagtaatggtgcatcctgatgatgaaagatatgctaaatttgtaggaaaa
gaggtcgttttgcctctaagcaaaaaagcgatcaaaattatcgctgatgaatctgtggaa
aaagactttggaacaggtgtagtaaaggtaactccagcacacgatatgaatgattatgaa
gtgggcttaagacaccatttagaatttcttagcgtttttgacgaaaaaggaattttaaat
gagcattgtttggaatttatgggtttagaaagacttgaagcgagagaaaaaatagtccaa
aaactcgaaaatttaggttttatcgaaaagatagaagagcatcataatcaagtgggctat
tgctatcgttgcaataatattgtagagccttatatctctaaacaatggtttgtcaaaaaa
gaaattgctcaaaaaagcatagaaaaagtcgccttaaataagacacaattttaccctagc
cactgggtcaatagctttaatgcttggatgcgagatttgcgtgattggtgcatttcaagg
cagctttggtggggacatcaaattcctgtttattactgcgagtgtggatgtgagtgggca
agtgaagatacacccaaatcttgcccaaaatgtggcagcactaattttcatcaagaccct
gatgtcttagatacttggtttagctcgggtctttgggctatgagcacacttggctggggt
aataaggactggggcaaggatcaattttggtttgaaaaagatttgagggaattttacccc
aattccttgcttattactggttttgacattttatttttctgggtcgctagaatgatgttt
caaagcacaaacgccctagaagaacttccttttaagcatatttatttacacgctttagtc
aaagacgagcaaggacgcaaaatgagcaaaagtcttggtaatgtcattgacccaaatgaa
agcattaaaacttatagtgctgatattttgcgttttactcttgctttgttagcggtgcaa
ggacgcgatataaaattaagcgaagataagcttttgcaagtaaggaattttacaaacaaa
atttacaatgcgacaaattatcttcttttaaacgaaaacaaatttgaagatttagaaaac
attactattcaaagtgagcttgctaaatttattgacgcaaagtttcaagaatgcctcaaa
caagtaagagaaaatttagaaaactaccgctttaatgatgcggcaaattatctttacaga
tttttttgggacgatttttgtgattgggggatcgagcttagtaaggcgcaaaaaagtagt
gttaaggagcttggaagcatttttaaagaagccttaaaagccttacatccttttatgcct
tttataagtgaatatacctaccataaattaagtggaagtgagcttgaaaatagcgcttcg
attatgataagtgcttatccaaatttgggtaacaaagatgaaaaaatagaacgcattttt
tctttattaatagaaagtatcattagcatacgccgagcaaaaagcttaattgagcttggt
aatgctaagattgaaaaggcttatattaagcttaataattctgctatgcaaagcgagata
gaaaaatatcaacatttcataactcttcttgcaaaatgtgaaaatatagaatttataagc
gaaaaattaaacaacgccatttgtgatgtgagtgaaaatttagaaattaacattaagctt
gacaatatagatttaagcgcgattatagcaagattagagaatcaaaaggcaaaactagaa
aaagaaattgctaaaattaacgcaatgttaagcaatgaaaaattcctatccaaagcacca
aaagacattatcctacaaaatcaaaatgccttaaataatcttaaagagcaatttgaaaag
gtacagatggaacttaaaaatttaaagggttaa
DBGET
integrated database retrieval system
