Curtobacterium sp. YC1: I8920_00840
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Entry
I8920_00840 CDS
T10236
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
cuy Curtobacterium sp. YC1
Pathway
cuy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cuy00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
I8920_00840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cuy03021
]
I8920_00840
Transcription machinery [BR:
cuy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I8920_00840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QQD76358
LinkDB
All DBs
Position
157861..158919
Genome browser
AA seq
352 aa
AA seq
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MTIATAAPSTTRRTATKKAAASKTATAETATTSLDTEVEADEQLAGVRGASVDQVGDYLR
HIGRLSLLTAEEEAQIARRIEVGLFAEEKLATEKGLAKTLQRELRWLVRDGERAKERMIT
SNLRLVVSIAKRYSQRGLPFMDVIQEGNLGLVRAVEKFDFTQGYKFSTYATWWIRQAISR
GLADKARTIRIPVHTVELINKISRTERDLTVDLGRAPMPEEVAAELSMSVDELVDLKGRS
HEPVSIHTVVGDSDDSELGDFIEDEDAASPNELTETTLLHRDIRSIVAELPSDEANVIRM
RYGLDDDKPMTLDEISKIVHTTRQAVSRVESRAKLRLFAKAVSQDMQLYLTD
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgcaacggctgcccccagcaccacccgccgcaccgccaccaagaaggctgcg
gcatcgaagaccgcgaccgccgagaccgcgaccacctccctcgacaccgaggtcgaggcg
gacgagcagctcgccggcgtccgcggtgcatccgtcgaccaggtcggcgactacctgcgt
cacatcggtcgcctctcgctcctcaccgccgaggaagaagcgcagatcgcccgccgcatc
gaggtcggtctcttcgccgaggagaagctggccaccgagaagggcctggcgaagaccctg
cagcgtgaactccgctggctcgtccgcgacggcgagcgtgccaaggagcggatgatcacc
tcgaacctccgtctggtcgtcagcatcgccaagcgctactcgcagcgcggcctgcccttc
atggacgtcatccaggagggcaacctcggcctggtccgtgcggtcgagaagttcgacttc
acgcagggctacaagttctcgacctacgccacctggtggatccgccaggcgatctcgcgc
ggtctcgccgacaaggcgcgcacgatccgcatcccggtgcacaccgtcgagctcatcaac
aagatctcgcgcaccgagcgtgacctgaccgtcgacctcggccgcgcgccgatgccagag
gaagtggccgccgagctgagcatgagcgtcgacgagctcgtcgatctcaagggccgttcg
cacgagccggtctcgatccacaccgtcgtcggcgactccgacgacagcgagctcggtgac
ttcatcgaggacgaggacgccgcgagcccgaacgagctcaccgagacgacgctcctgcac
cgcgacatccgctccatcgtcgccgagctgccgagcgacgaggccaacgtgatccgcatg
cgctacggcctggacgacgacaagccgatgacgctcgacgagatctcgaagatcgtgcac
acgacccgtcaggcggtcagccgtgtcgagtcgcgtgccaagctgcgcctgttcgccaag
gcggtctcgcaggacatgcagctgtacctgaccgactga
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