Curtobacterium sp. YC1: I8920_04250
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Entry
I8920_04250 CDS
T10236
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cuy Curtobacterium sp. YC1
Pathway
cuy03420
Nucleotide excision repair
cuy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cuy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I8920_04250
03430 Mismatch repair
I8920_04250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cuy03400
]
I8920_04250
Enzymes [BR:
cuy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I8920_04250
DNA repair and recombination proteins [BR:
cuy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I8920_04250
MMR (mismatch excision repair)
Other MMR factors
I8920_04250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QQD77672
UniProt:
A0A7T5BLA1
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All DBs
Position
865556..868783
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AA seq
1075 aa
AA seq
DB search
MPDPAAAPPVIRHGADAVADALGRPRPTAQQRAVIESPLVPALVVAGAGSGKTETMASRV
VWLLANGLVRPDEVLGLTFTRKAAGELSVRINDRIRALEDVGLITPGDAFEAPTVSTYNA
FANAVFRENALLVGRDGESQVLTEPSAWQLARRVVVAARDDRLAGLDRDVDTLTAAVVAL
AGATSEHLVEPEDLRRFAVEFSGLLELPGNRGKPYKAITDAVAAIGALDPLADLVAEFRR
QKIDRGFVEFSDQIALALAAAESAPRVVTDLRQRYRVVLLDEYQDTSVVQTRFLARLFRG
HSVMAVGDPHQSIYGFRGASAANLARFPHDFGGDEADAARPVTFALSTSWRNPVDVLAGA
NAVVAPLSEASEVDVERLSPRPGADAGAVRVVFPETLPEEADEVAAWFQDHRRRDASTSM
ALLLRARKDLAAFTAALGARGVPYHVLGTGGLLQRPEIVDLVACLRVLHDPAAGNDLIRL
LAGARWRVGAADIVALHRLASWLFQRDHTHQRLDDDLTAAFRASVAAGEHGSIVDALDFV
ATAPDEHGALEAVTPAGRARMRELGAQLALLRSRAGGDLVDFVTLVVQEMRLDIEVAAHE
QGSGAYLDAFVDELAGFVATDDRADLGSFLGWIDAAARRDDMGPRSEEPEAGTVQILTIH
GSKGLEWDAVAVPRMVEGGLPARPQEGSSGWLGFGRLPYEFRGDAAELPRLAWRGQETQK
EVTTAIDAFKEQVKARNEDEERRLTYVALTRARHDLLVSGSFWAGGVRPTEPSRYLRDLV
DAGVIDGAAIPETTVHDENPMGESGATQSWPHVPFGQRAPRVLAAAERVRNANPGAAGRF
AADIDLLLAERAATRNAKHAVAVPHRVPASGFKDYLTEPDSVAERLRRPMPERPYRATRL
GTLFHQWVEQRARSGGALETLDVWDGELDLDADDRVDASADAVVTDDDARRLADFQATFA
RSRWAGRTPVEVEREIHIPFLGHSVVCKLDAVYEIDGRAEVVDWKTGKAPSGAEDLARRT
LQLALYRVAYAEFTGRPLAEVDAVFYFVADDLEVRPAELLDRAGLERAWSAAVGS
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
gtgccggacccggccgctgcgccgcccgtcatccggcacggggccgacgccgtcgccgac
gcactcggtcgcccgcggcccacggcccagcaacgcgccgtcatcgagtcgccgctcgtg
ccggccctggtcgtggcgggcgccggcagcgggaagaccgagaccatggcctcccgcgtg
gtctggctgctggccaacgggctcgtccgccccgacgaggtcctggggctgacgttcacg
cgcaaggccgccggtgagctgtccgtccgcatcaacgaccgcatccgcgcgctggaggac
gtgggtctgatcacgccgggcgacgcgttcgaggcccccaccgtctcgacgtacaacgcc
ttcgcgaacgccgtcttccgcgagaacgcactgctcgtcggccgtgacggcgagtcgcag
gtgctcaccgaaccatccgcgtggcagctcgcccgccgggtcgtggtggccgcccgcgac
gaccgcctggcgggcctcgaccgcgacgtcgacaccctgaccgccgccgtcgtggcgctc
gccggggccacgtccgagcacctcgtcgaaccggaggacctgcgccggttcgccgtcgag
ttctccggcctgctcgagctgcccggcaaccgtggcaagccgtacaaggccatcaccgac
gcggtcgcggcgatcggtgcgctcgacccgctggccgacctggtcgcggagttccgtcgg
cagaagatcgaccgcgggttcgtggagttctccgaccagatcgccctcgcgctcgcggcg
gccgagtccgccccgcgggtcgtcaccgacctgcggcagcggtaccgcgtggtgctgctc
gacgagtaccaggacacctcggtggtgcagacgcggttcctcgcccggctgttccgcgga
cactcggtgatggccgtcggtgacccgcaccagtcgatctacggtttccgcggggcgagt
gccgcgaacctcgcccggttcccgcacgacttcggcggtgacgaggcggacgcggcacga
ccggtgacgttcgccctgtcgacgagctggcgcaacccggtcgacgtgctcgccggcgcg
aacgccgtcgtcgcgccgctgtccgaggcgtccgaggtcgacgtcgagcggctgtccccg
cgacccggtgccgacgccggggccgtccgggtcgtcttcccggagaccctgccggaggaa
gccgacgaggtcgccgcgtggttccaggaccaccggcggcgggacgcatcgacgtcgatg
gcgctgttgctccgcgcacggaaggacctggcggcgttcactgcggcgctcggcgcacgc
ggcgtgccgtaccacgtgctcggcaccggcggtctgctgcagcgtccggagatcgtcgac
ctggtcgcctgcctccgggtgctgcacgacccggccgccggcaacgacctgatccgcctc
ctcgccggggcgcggtggcgagtgggagcggcggacatcgtcgcactgcaccggctggcg
agctggttgttccagcgcgaccacacgcaccagcgtctggacgacgacctgacggcggcg
ttccgggcatcggtcgcggcgggggagcacggctcgatcgtcgacgcgctcgacttcgtc
gcgacggctcccgacgagcacggtgcgctcgaggccgtcacgccggccggccgtgcgcgg
atgcgagagctgggcgcgcagctcgccctgctccggtcgcgggccggcggcgacctcgtc
gacttcgtgaccctcgtggtgcaggagatgcgcctggacatcgaggtcgccgcgcacgag
caggggagcggcgcgtacctcgacgcgttcgtcgacgaactcgcgggcttcgtggccacc
gacgatcgcgccgacctcgggtcgttcctggggtggatcgacgccgcggcccggcgcgac
gacatgggaccgcggtccgaggaaccggaggccggcaccgtccagatcctgacgatccac
ggctccaagggactggagtgggacgccgtggcggtgccgcggatggtcgagggcgggctg
ccggcacgcccgcaggaagggtcctccgggtggctcggcttcggccgactgccgtacgag
ttccgcggggacgccgccgagctgccccgcctggcgtggcgcgggcaggagacccagaag
gaagtcaccacggcgatcgacgccttcaaggagcaggtgaaggcccgcaacgaggacgag
gaacgccgactcacctacgtcgcgctcacccgcgcgcgtcacgacctgctggtgtccggt
tcgttctgggccggcggggtccgtccgaccgagccgagccggtacctgcgtgacctggtg
gacgccggcgtcatcgacggtgcggcgatccccgagaccaccgtgcacgacgagaacccg
atgggcgagagcggcgccacccagtcctggccccacgtgccgttcgggcagcgcgcacct
cgtgtcctggccgccgccgagcgggtgcggaacgccaacccgggtgccgcgggtcgcttc
gccgccgacatcgacctgctgctcgccgagcgggccgcgacccggaacgcgaagcacgcg
gtcgcggtcccgcaccgcgtccccgcgtcgggcttcaaggactacctgaccgagccggac
tcggtggccgagcggctccgtcgtcccatgccggagcgcccgtaccgggcgacccgactc
ggcacgctgttccaccagtgggtggagcagcgggcccggagcggcggtgccctcgagacg
ctcgacgtctgggacggcgaactcgacctcgacgccgacgaccgcgtcgacgcctccgcg
gacgcggtcgtcaccgacgacgatgctcggcggctcgccgacttccaggccacgttcgcg
cggtcacggtgggccgggcgcacgccggtcgaggtcgagcgcgagatccacatcccgttc
ctcgggcacagcgtcgtgtgcaagctcgacgccgtgtacgagatcgatgggcgtgccgag
gtggtcgactggaagaccggcaaggcgccgtcgggagccgaggacctcgcgcgccggacc
ctgcagctggcgctgtaccgcgtcgcctacgccgagttcaccggccgaccgctcgccgag
gtcgacgcggtgttctacttcgtcgccgacgacctcgaggtgcgccccgccgagctgctg
gaccgcgccggactcgaacgcgcctggagcgcggccgtcggcagctga
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