Curtobacterium sp. YC1: I8920_05905
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Entry
I8920_05905 CDS
T10236
Name
(GenBank) DEAD/DEAH box helicase
Organism
cuy Curtobacterium sp. YC1
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SWIM
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
QQD77262
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All DBs
Position
complement(1236661..1240107)
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AA seq
1148 aa
AA seq
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MPAAPMIDAVDVIRFVGPQTFGRARDVVRAGLVDDATWHTDDGTVTATVSGTADDPYELR
IDTTPARGDFVRPVRSTCSCPLGGDCKHVAAALLTINARALAANAGPRPEAPAPPPSDWR
HDLARLAGDDEQAVTPQGTRMGLQFELRDAVPARLASRARAAGRALPAPSRSVRLGVRPV
TRSDAGNWVRGQLTWGTLPYSQNRLGVGADQHAWFLQLAALHRAGQLAGLPGESDWLHLD
DFRSPLLWPLLRQAAALDIAFVTGKREGGAVLGEQAQVLLDVARHDGAVVIGASAVLDGR
PVVPGAARMIGDHGVYVFREAPDFTVGLAPTPAPVPADQRRMLLEGSRITVPDAEVDEFL
ADWSPRLRGALGLVSSDGSVELPERTPPELVLTATFEPARAPRTDDRVHLHWRWHVDGRK
DPVSLHGPLPDLSVLRAADDPADDDDPAGTDVPSGTDAGPVADPAAAVEPTTAATQADDA
AQAGPPDRPTGPGGGLDWFQDGTIDGADVAVFANELLPELPALGIRTVVQGERLDYERLS
GRPHIRVTTMPSDKHDWFDLGIIVSVNGKHIPFTPLLTALASRQRRLKLVDNSYLSLADP
AFDRLKELIDEARDLDEWEPDQPIAVTPLHAGLWSEFDLLADETSHDERWQAVTAGLLGA
TPPGDVAVPDTVHAELRPYQHAGYAWLSFLASHGIGGVLADDMGLGKTLQVLAMIAARRA
AEPAAPPFLVVAPTSVVGNWAAEAAKFVPSLRVATVTSTSLKDPGLVARTASQADVVVTS
YALLRLDAQAWTDLPWSALVLDEAQFVKNPQSQTHRVASELQAPVKFAITGTPLENGLTD
LWALFHIVAPGLLSSWTRFGDDYVKPLASPDLRGEARQELTARLRRRIRPLMLRRTKEAV
AADLPPKQEQVVRVTLDPAHRELYERTLNRERLKVLDLIDDLSKNRMIVFRSLTLLRMLA
LSPALVSSPPSDSDVSAPPIPSAKLDLLLDELEQLAAEGRRALVFSQFTSFLRMVSDALD
ARAIGYEYLDGSTRKRPEVIERFRQGTAPAFLISLKSGGFGLTLTEADTVFVLDPWWNPA
AESQAVDRTHRIGQTRSVTVQRFIAEDTIEEKVLALAAKKAELFATMIDDDALFADDLTA
DDIRSLLA
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
gtgccagcagccccgatgatcgacgccgtcgacgtcatccgtttcgtcgggccgcagacc
ttcggccgtgcacgcgacgtcgtgcgggccggcctggtggacgacgccacctggcacacc
gacgacggcacggtcactgcgaccgtctccggcaccgccgacgacccctacgagttgcgg
atcgacaccaccccggcccgtggcgacttcgtccgcccggtccggagcacctgcagctgt
cccctcggcggcgactgcaagcacgtggccgccgcgctgctcaccatcaacgcccgcgca
ctcgccgcgaacgccggcccacgcccggaagcgccggctccgccaccgtcggactggagg
cacgacctcgcccgcctcgccggtgacgacgagcaggcggtcaccccgcagggcacgcgg
atgggtctgcagttcgagttgcgtgacgcggtcccggccaggctcgcctcccgcgctcgc
gcggccggcagggcgctgccggcgccgtcgcgctccgtccggctcggggtccgcccggtg
acccgcagcgacgccggcaactgggtccgagggcagctgacctggggcacgctcccctac
tcgcagaaccgcctgggcgtcggtgccgaccagcacgcctggttcctgcagctcgcggcc
ctgcaccgtgccgggcagctcgctgggctgccgggcgagagcgactggctgcacctcgac
gacttccgcagcccgctgctgtggccgctgctccggcaggccgcggcgctcgacatcgcg
ttcgtcaccggcaagcgtgagggcggtgcggtcctcggcgagcaggcgcaggtgctgctc
gacgtggcgcggcacgacggcgccgtggtgatcggggcgagcgccgtgctcgacggccgg
cccgtcgtgcccggagccgcgcggatgatcggcgaccacggcgtctacgtcttccgtgag
gctcccgacttcaccgtcggcctggctccgacacccgcgcccgtgccggcggaccagcgc
cggatgctgctcgaggggtcgcgcatcaccgtgccggacgccgaggtcgacgagttcctg
gccgactggtcgccccggctgcgcggtgccctcggcctggtcagctccgacgggtcggtg
gagctgcccgagcgcacgccgccggaactcgtgctcaccgcgacgttcgaaccggcccgg
gcgccgcgcaccgacgaccgggtgcacctgcactggcgctggcacgtcgacggtcggaag
gacccggtctcgctgcacggaccgctccccgacctgtcggtgctccgcgccgccgacgat
cctgcggacgacgacgatccggccggcaccgacgttccgtccggcaccgacgccggtccc
gtggcggacccggccgcggcggtggagccgaccacggcggcgacgcaggccgacgacgcg
gcacaggccgggcctcccgaccggccgacgggaccgggtggcggactggactggttccag
gacggcaccatcgacggggccgacgtcgcggtgttcgcgaacgagctgctgccggagctc
ccagcgctcggcatccgcacggtggtgcagggtgagcggctcgactacgagcggttgagc
ggacggccgcacatccgtgtgacgacgatgccgtcggacaagcacgactggttcgacctc
ggcatcatcgtcagcgtcaacggcaagcacatcccgttcacgccgctgctcaccgcgctc
gcgagccggcagcgacggttgaagctcgtcgacaactcgtacctgtccctcgccgacccc
gcgttcgaccggctcaaggaactcatcgacgaagcccgcgacctggacgagtgggagccg
gaccagccgatcgccgtgaccccgctgcacgccggactgtggtcggagttcgacctgctg
gccgacgagacgtcgcacgacgaacgctggcaggccgtcaccgccggactgctcggggcg
actcccccgggcgacgtcgccgtgccggacaccgtgcacgccgagctgcggccgtaccag
cacgccgggtacgcctggttgtcgttcctggcctcgcacggcatcggcggggtgctcgcc
gacgacatggggctcggcaagacgctgcaggtgctcgcgatgatcgccgcccgtcgtgcc
gccgagcccgcggcgccgccgttcctcgtcgtcgcgccgacctcggtcgtgggcaactgg
gcggccgaggcggcgaagttcgtgccgtcgctgcgggtcgccacggtcacctcgacctcg
ttgaaggacccgggcctcgtcgcccggacggcgtcgcaggccgacgtcgtcgtcacctcg
tacgcgctcctgcggctcgacgcccaggcgtggaccgacctgccgtggtcggcactcgtg
ctcgacgaggcgcagttcgtgaagaacccgcagtcccagacccaccgcgtggcgtcggag
ctgcaggcaccggtgaagttcgcgatcaccggcaccccgctcgagaacgggctgaccgac
ctgtgggcactgttccacatcgtcgcgcccgggctgctgtcgagctggacccggttcggc
gacgactacgtgaagcccctcgcctcccccgacctgcgtggcgaggcccggcaggagctc
accgcgcggctgcggcgacggatccggccgctcatgctccggcgcacgaaggaggccgtc
gccgccgacctgccgcccaagcaggaacaggtcgtccgcgtcacgctcgaccccgcgcac
cgggagctgtacgagcgcacgttgaaccgggagcggctcaaggtcctcgacctcatcgac
gacctgtcgaagaaccggatgatcgtcttccggtcgctgacgctgctgcgcatgctcgcg
ctgtcgccggcactggtgtcgtcgccgccgagcgactcggacgtctccgcacctccgatc
ccctcggccaagctcgacctgctgctcgacgagctcgagcagctcgccgccgagggtcgc
cgcgccctggtgttcagccagttcacctcgttcctgcgcatggtgtcggacgccctcgac
gctcgagcgatcgggtacgagtacctcgacggttccacgcgcaagcgccccgaggtcatc
gagcgcttccggcagggcaccgcgcccgcgttcctcatctcgctcaagtccggcgggttc
gggctcaccctgaccgaggcggacaccgtgttcgtgctcgacccgtggtggaaccccgcc
gccgagtcccaggcagtcgaccgcacgcaccgcatcgggcagacccggtcggtcacggtg
cagcggttcatcgccgaggacaccatcgaagagaaggtgctggccctcgccgcgaagaag
gccgaactgttcgccacgatgatcgacgacgacgccctgttcgccgacgacctgaccgcc
gacgacatccgttccctgctggcctga
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