Curtobacterium sp. YC1: I8920_06385
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Entry
I8920_06385 CDS
T10236
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cuy Curtobacterium sp. YC1
Pathway
cuy03030
DNA replication
cuy03430
Mismatch repair
cuy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cuy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I8920_06385 (dnaE)
03430 Mismatch repair
I8920_06385 (dnaE)
03440 Homologous recombination
I8920_06385 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cuy03032
]
I8920_06385 (dnaE)
03400 DNA repair and recombination proteins [BR:
cuy03400
]
I8920_06385 (dnaE)
Enzymes [BR:
cuy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I8920_06385 (dnaE)
DNA replication proteins [BR:
cuy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I8920_06385 (dnaE)
DNA repair and recombination proteins [BR:
cuy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I8920_06385 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
Motif
Other DBs
NCBI-ProteinID:
QQD77351
UniProt:
A0A7T5BM31
LinkDB
All DBs
Position
1338629..1342159
Genome browser
AA seq
1176 aa
AA seq
DB search
MSDSDSFVHLHVHSEYSMLDGAARLSDLVAETAAQGMPAVAVTDHGNMFGAFEFWKAAKA
GGVKPIIGTEAYITPRTHRSDKTRVRWGDGGGDDVSGAGSYTHMTMFAENTTGMHNLFRL
SSKASLEGYYFKPRMDIELLQEYHEGIIATTGCPSGEIQTRLRLGQYDEARQAAADYRDI
FGKENYFAEVMDHGLEIERRIMTDLIRLAKDLDIPLVGTNDLHYTHAHDAKSHAALLCVQ
SGSTLNDPNRFKFDADEFYLKTPAQMRHVFRDNLEACDNTLLIAERCNVEFDTAANYMPK
FPVPEGETEHSWFEKEVAKGLEYRYPGGISKEVQERADYEVGIINQMGFPGYFLVVADFI
NWSKNNGIRVGPGRGSGAGSMVAYAMRITDLDPIRHGLIFERFLNPDRVSMPDFDVDFDD
RRRGEAIKYVTEKYGSERVAQIVTYGTIKAKQALKDSSRVLGFPFGMGEKLTKAMPPPVM
GKDIPLTGIFDKDHPRYKEAVDVRTVVETDPEAKTVFDTALGLEGLKRQWGVHAAGVIMS
SDPLIDIIPIMKREQDGQIVTQFDYPAAESLGLIKMDFLGLRNLTIISDALDNIKTNRGT
ELDLETMGLEDPEAYALLQRGDTLGVFQLDGGPMRGLLRLMKPDNFEDISALIALYRPGP
MGANSHTNYALRKNGEQPITPIHPELEEPLKDIIGTTYGLIIYQEQVMAIAQKVAGFSLG
QADILRRAMGKKKKSELDKQYAGFQQGMKDNGYSDAAIKTLWDILLPFSDYAFNKAHSAA
YGVVSFWTAYLKAHYPAEYMAALLTSVGDARDKLALYLNECRRMGIRVMPPDVNESIGFF
AAVGDDIRFGMGAIRNVGFNVVDDIVKARTEKGAFESFHDFLRKIPISSANKRTVESLIK
AGAFDEFGDTRRALVEIHEGAVEGAVKVKRDEANGNVGFDFDSLFAEVAEDAPSAAVSQV
PDRPEWSKRDKLAFERDMLGLYVSDHPLAGLEIELAKHQSITIADLLTADDSIEGETVTV
AGLLTSVQHRVAKSSGNPYGIVQIEDFGGEIGVMFLGKTYQEFGPSLVADSIVVLRGRVN
VRDDGKALHAVSMFQPNVGDAMGSGPLTLSLPERQATTTTVTELAAVLGRHRGETEVRLK
LLKDEVARTFELPFPVNLTPDLFGELKSLLGPRCLV
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggattccgactccttcgtccacctgcacgtgcacagcgagtactcgatgctcgac
ggtgccgccaggctctccgacctcgtggcggagaccgccgcgcagggcatgcccgcggtg
gcggtgacggaccacggcaacatgttcggcgcgttcgagttctggaaggccgcgaaggcc
ggcggcgtcaagccgatcatcgggaccgaggcgtacatcacgccgcgcacccaccgctcg
gacaagacccgtgtgcgctggggcgacggcggcggggacgacgtgtcgggtgccgggtcg
tacacgcacatgacgatgttcgccgagaacacgaccggcatgcacaacctgttccggctg
tcgtcgaaggcgtcgctcgagggctactacttcaagccccgcatggacatcgagctgctg
caggagtaccacgaggggatcatcgccacgacgggctgcccctccggcgagatccagacg
cggctgcgcctcgggcagtacgacgaggcccgacaggcagcggcggactaccgcgacatc
ttcggcaaggagaactacttcgccgaggtcatggaccacggcctcgagatcgagcgccgg
atcatgacggacctcatccgcctggcgaaggacctcgacatcccgctggtcggcacgaac
gacctgcactacacgcacgcccacgacgccaagtcgcacgccgcgctcctgtgcgtgcag
tcggggtcgacgctgaacgacccgaaccgcttcaagttcgacgccgacgagttctacctg
aagacgcccgcgcagatgcgccacgtcttccgtgacaacctcgaggcctgcgacaacacg
ctgctcatcgccgagcggtgcaacgtcgagttcgacaccgccgccaactacatgccgaag
ttcccggtgcccgagggcgagacggagcactcctggttcgagaaggaggtcgcgaagggg
ctggagtaccggtacccgggcggcatctcgaaggaggtccaggagcgcgcggactacgag
gtcggcatcatcaaccagatgggcttcccgggctacttcctggtggtcgccgacttcatc
aactggtcgaagaacaacggcatccgggtcggtccgggccgtggctccggtgccggttcg
atggtcgcgtacgcgatgcgcatcaccgacctcgacccgatccggcacggcctgatcttc
gagcgattcctcaacccggaccgcgtctcgatgcccgacttcgacgtcgacttcgacgac
cgtcgccgcggtgaggcgatcaagtacgtcaccgagaagtacgggtccgagcgcgtcgcg
cagatcgtcacgtacggcaccatcaaggcgaagcaggcgctcaaggactcctcgcgggtg
ctcgggttcccgttcggcatgggtgagaagctcaccaaggcgatgccgccgcccgtgatg
ggcaaggacatcccgctcaccgggatcttcgacaaggaccacccgcggtacaaggaagcc
gtcgacgtccgcaccgtggtcgagaccgaccccgaggcgaagaccgtcttcgacaccgcg
ctcggcctcgaggggctgaagcgccagtggggcgtgcacgccgccggcgtcatcatgtcg
agcgacccgctcatcgacatcatcccgatcatgaagcgggagcaggacggccagatcgtc
acgcagttcgactacccggcagcggagtcgctcggcctgatcaagatggacttcctgggg
ctccgcaacctcacgatcatcagtgacgccctcgacaacatcaagaccaaccgcggcacc
gaactcgacctcgagacgatgggcctcgaggacccggaggcctacgccctgctgcagcgc
ggcgacaccctgggcgtgttccagctcgacggcggcccgatgcgcggtctgctgcgcctg
atgaagcccgacaacttcgaggacatctccgcgctcatcgccctgtaccgtccggggccg
atgggtgcgaactcgcacacgaactacgcgctccgcaagaacggcgagcagccgatcacg
ccgatccacccggagctcgaggagcccctcaaggacatcatcggcacgacctacggcctg
atcatctaccaggagcaggtcatggcgatcgcgcagaaggtcgcggggttctccctcggc
caggcggacatcctccgccgcgcgatgggcaagaagaagaagtccgagctggacaagcag
tacgcgggcttccagcagggcatgaaggacaacgggtactccgacgcggcgatcaagacg
ctgtgggacatcctgctgccgttctccgactacgcgttcaacaaggcgcactcggcggcg
tacggcgtggtgtcgttctggacggcctacctcaaggcgcactacccggccgagtacatg
gcggcgctgctgacgagtgtcggcgacgcccgcgacaagctcgcgctctacctgaacgag
tgccgtcgcatgggcatccgggtgatgccgccggacgtcaacgagtcgatcggcttcttc
gccgccgtcggcgacgacatccgcttcggcatgggcgcgatccgcaacgtgggcttcaac
gtcgtcgacgacatcgtgaaggcccgcaccgagaagggcgccttcgagtccttccacgac
ttcctgcgcaagatcccgatctcgtcggcgaacaagcgcacggtggagtcgctcatcaag
gccggtgcgttcgacgagttcggcgacacccgacgtgccctggtggagatccacgagggt
gccgtcgagggtgcggtcaaggtgaagcgcgacgaggccaacggcaacgtcggcttcgat
ttcgactccctcttcgccgaggtcgccgaggatgccccgagcgccgcggtgtcccaggtg
ccggaccgcccggagtggtcgaagcgcgacaagctggcgttcgagcgcgacatgctcggg
ctctacgtgtccgaccacccgctcgccgggctcgagatcgagctcgcgaagcaccagtcg
atcaccatcgccgacctgctgaccgccgacgactccatcgagggcgagaccgtcaccgtg
gccggcctgctgacgagcgtgcagcaccgggtggcgaagtcgagcggcaatccgtacggc
atcgtccagatcgaggacttcggcggcgagatcggcgtcatgttcctcggcaagacgtac
caggagttcggtccctcgctcgtggccgactcgatcgtcgtgctgcgcggccgtgtgaac
gtccgagacgacggcaaggccctgcacgcggtgagcatgttccagccgaacgtcggcgac
gcgatgggctccggcccgctcacgctgtcgctgcccgaacggcaggcgaccaccacgacc
gtcacggaactcgccgccgtgctcggccggcaccggggcgagaccgaggtgcggctgaaa
ctgctcaaggacgaggtcgcgcggaccttcgagctgccgttcccggtcaacctgacgccg
gacctgttcggggagctgaagagcctgctcgggccgcgctgcctggtgtag
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