Curtobacterium sp. YC1: I8920_10615
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Entry
I8920_10615 CDS
T10236
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cuy Curtobacterium sp. YC1
Brite
KEGG Orthology (KO) [BR:
cuy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cuy03032
]
I8920_10615 (topA)
03400 DNA repair and recombination proteins [BR:
cuy03400
]
I8920_10615 (topA)
Enzymes [BR:
cuy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
I8920_10615 (topA)
DNA replication proteins [BR:
cuy03032
]
Prokaryotic type
DNA Topoisomerases
I8920_10615 (topA)
DNA repair and recombination proteins [BR:
cuy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I8920_10615 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QQD75302
UniProt:
A0A7T5BJ60
LinkDB
All DBs
Position
complement(2271873..2274695)
Genome browser
AA seq
940 aa
AA seq
DB search
MPGTKKLVIVESPAKAKTIAQYLGDGYDVQASVGHIRDLVEPKNLPAELKKGSLGKFSVD
VDNGFEPYYVVSDAKKKTVSELKRALKDADELYLATDEDREGEAIAWHLLQVLKPKVPVK
RMVFHEITKEAIQRAQEATRELDTSLVDAQETRRILDRLYGYEVSPVLWRKVAPGLSAGR
VQSAATRLVVDRERERLAFVSANYWDLSARFEKAGESSFSARLARIHGTRVASGRDFDDR
GTLSGDVVRLDEAAAASLTTVLERAGDATVRSVDSKPYTRRPAAPFTTSTLQQEAARKLR
LSPRQTARAAQTLYENGYITYIRTDSVSLSKQAIDAARKQAADLYGAATVPDKPRLYASK
SKNAQEAHEAIRPAGDSFRTPQDLQGTLTGVEWRLYDLIWKRTIASQMADAKGSTASIVL
GIASTESVEGIASTANGTDAEFTASGTVITFRGFLSAYEEGRDEDRHESSERAGQDVALP
NVSEGEHLAVTDVEAKGHDTTPPPRFTEASLIKTLEELGIGRPSTYPTISPTIIDRGYVS
LRGTQLVPNWIAFSVVRLLEEYFGELVEYDFTAEMEEDLDRIARGDADRVDWLKGFYFGG
GDDDQRGLRTVIDNLGEIDAREINSVELAPGLTLRIGRYGPYIEVPSDDPEKPRRVNVPE
DLAPDELTVDKAKELVDAPVLGDRVVGVNPETGKEVLAKDGRFGPYVTERTPEPEPTVDP
KTGEVIEAAPAAAETTDASATAEAAAGTTATAGKAPAKKAPAKKTTKKAAAPKERTASLF
KSMDPQTVDLETALKLLDLPRVVGQDPETGNDITAQNGRYGPYLKKGTDTRTLPSEDAIF
DIDLPGALELFAQPKYGGNRTASAALKEFDADPVSGKPIKMKDGRFGPYVTDGETNATIP
RGEDVEAVDHARAVQLIADKRAKGPVKKKTPARRTAAKKK
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
gtgccaggcacgaagaagctcgtgatcgtcgagagccctgcgaaggcgaagacgatcgcg
caatacctcggtgacggatacgacgtccaggcctcggtcggacacatccgcgacctcgtc
gagcccaagaacctcccggccgagctcaagaagggctcgctcggcaagttctcggtggac
gtcgacaacggcttcgagccgtactacgtcgtgtccgacgccaagaagaagacggtctcc
gaactcaagcgtgccctgaaggacgccgacgagctctacctcgcaacagatgaagaccgc
gagggtgaggccatcgcgtggcacctcctgcaggtcctcaagccgaaggtccccgtcaag
cggatggtcttccacgagatcaccaaggaggcgatccagcgcgcgcaggaggcgacccgc
gagctcgacacctccctcgtcgacgcgcaggagacccgccgcatcctcgaccgcctgtac
gggtacgaggtctcaccggtgctgtggcgcaaggtcgccccgggcctgtccgccggccgc
gtgcagtccgcggcgacgcgtctggtcgtcgaccgcgagcgcgagcgtctggccttcgtc
tccgccaactactgggacctctccgcccggttcgagaaggccggcgagtcctccttctcc
gcccggctcgcgcggatccacggcacccgggtcgcgtccggccgtgacttcgacgaccgc
ggcacgctcagcggtgacgtcgtccgtctcgacgaggccgcagcggcgtcgctgacgacc
gtcctcgagcgcgccggcgacgccacggtccgcagcgtcgactcgaagccgtacacgcgt
cgcccggcggcgccgttcaccacctcgaccctccagcaggaggcggcgcgcaagctccgg
ctgtcgccgcggcagaccgcccgtgccgcgcagaccctgtacgagaacggctacatcacc
tacatccgtaccgactccgtctcgctctcgaagcaggcgatcgacgcggcgcgcaagcag
gcggccgacctgtacggtgcggcgacggtgccggacaagccccggctgtacgccagcaag
agcaagaacgcgcaggaggcacacgaggccatccgccccgccggtgactcgttccgcacc
ccgcaggacctgcagggcaccctgaccggtgtcgagtggcgcctgtacgacctcatctgg
aagcgcaccatcgcgtcgcagatggcggacgccaagggatcgaccgcgtcgatcgtgctc
ggcatcgcgtcgaccgagtcggtggagggcatcgcctcgaccgcgaacggcacggacgcc
gagttcaccgcctccggcacggtcatcacgttccgtggcttcctcagcgcgtacgaagag
ggccgtgacgaggaccgccacgagtcctccgagcgtgcgggccaggacgtcgccctgccg
aacgtgtccgagggcgagcacctcgccgtgacggacgtcgaggcgaagggccacgacacc
acgccgccgccgcgcttcaccgaggccagcctgatcaagacgctggaagagctggggatc
gggcgcccgtcgacctaccccaccatcagcccgacgatcatcgaccgtggctacgtgtcg
ctccgcggcacccagctcgtgccgaactggatcgcgttcagcgtggtgcgtctgctcgag
gagtacttcggcgagctggtggagtacgacttcaccgctgagatggaagaggacctcgac
cgcatcgcgcgcggtgacgcagaccgagtcgactggttgaagggcttctacttcggtggc
ggcgacgacgaccagcgcggcctccggacggtcatcgacaacctcggtgagatcgacgcg
cgtgagatcaactcggtcgaactcgcgccgggcctcaccctgcggatcggtcgctacggc
ccctacatcgaggtgccgagcgacgacccggagaagccccgtcgggtcaacgtgcccgag
gacctggcccccgacgagctcaccgtggacaaggcgaaggaactcgtcgacgcccctgtg
ctcggcgaccgcgtcgtcggtgtgaacccggagaccggcaaggaggtcctggcgaaggac
ggccgcttcggtccctacgtcacggagcgcacgcccgaacccgagccgacggtggacccg
aagaccggcgaggtcatcgaggcggcccccgcggcagcggagacgaccgacgcctctgcc
acggccgaggccgccgcgggcacgaccgccacggcggggaaggctccggcgaagaaggct
ccggcgaagaagacgaccaagaaggccgccgctccgaaggaacgcaccgcgtcgctcttc
aagtcgatggacccgcagaccgtcgacctcgagaccgcgctcaagctcctcgacctgccg
cgcgtcgtcgggcaggacccggaaacgggcaacgacatcaccgcgcagaacggccggtac
ggtccgtacctgaagaaggggacggacacccggacgctccccagcgaggacgcgatcttc
gacatcgacctgccgggcgcgctcgagctcttcgcacagccgaagtacggcggcaaccgg
accgccagcgccgcgctcaaggagttcgacgccgacccggtctccggcaagccgatcaag
atgaaggacggccggttcggcccctacgtcaccgacggcgagacgaacgcgacgatcccg
cggggcgaggacgtcgaggcggtcgaccacgcgcgtgccgtgcagctgatcgcggacaag
cgggccaaggggccggtcaagaagaagaccccggcccgccggacggcggccaagaagaag
tga
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