Curtobacterium sp. YC1: I8920_14255
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Entry
I8920_14255 CDS
T10236
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cuy Curtobacterium sp. YC1
Pathway
cuy03420
Nucleotide excision repair
cuy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cuy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I8920_14255
03430 Mismatch repair
I8920_14255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cuy03400
]
I8920_14255
Enzymes [BR:
cuy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I8920_14255
DNA repair and recombination proteins [BR:
cuy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I8920_14255
MMR (mismatch excision repair)
Other MMR factors
I8920_14255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_12
Viral_helicase1
AAA_30
AAA_11
AAA_22
PAC4
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
QQD75947
LinkDB
All DBs
Position
complement(3022313..3024760)
Genome browser
AA seq
815 aa
AA seq
DB search
MTIVLDPFESTPEPGAGARAYEDPFTAGLNPQQKEAVEYRGESLLIVAGAGSGKTSVLTR
RIALLLANREAWPSQILAITFTNKAAAEMRERVRALVGGEAEGMWISTFHSACVRILRRE
AERFGFPQSFTIYDSADSKALLKRIVKELEADSLGLTVGAAASKISKLKNELQDIDTYAR
NINVNDPQEVMFTEVFRRYTNELRRANAFDFDDLIGQTVFLFRAFPDVAALYQRRFRFIL
VDEYQDTNHAQYALIRELTRAVPVDQVDKLEDSGQHVARMREADGSIAPASLTVVGDSDQ
SIYAFRGADIRNIVEFERDFPNSKVILLEQNYRSTQNILDAANAVIANNFDRQAKNLFTD
VGAGEKIVGFTGYTGHDEAQFVADEIQRLREDGTDYRDMAVFYRTNSQTRALEEIFIRAA
IPYRVLGGTKFYERAEIKDAMAYLITVANPADPMALRRILNVPKRGIGAVTETTLQRYAD
EHETTMRDALRHAGELGFGPKVRNAITEFAGLLDSVSEKAPTQPVVDTLTQLLDGSGLLE
NLRKSPDAQDAARADNIDELVAVTREFQKNNPEGTLSDFLTEVSLVAAADELDDSSGTVS
LMTLHTAKGLEYDAVFLTGVEEDLLPHRMSANEPGGPSEERRLFYVGITRAKKSLFLSLA
MTRAQFGDVNVAMPSRFLQEIPEGLIEWKQSPGMANSRGGTQPRALNAKREGGFGGGGGG
GGYRGGGGWGGGSYDRAAAASKTRPKTEWANRVSGQVRDNGDMELAAGDRIKHVDFGEGT
VSAVTGQGAKRIAEIAFDSAGRKKLLIKIAPIEKL
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgtgctcgaccccttcgaatcgacgcccgagccgggcgccggtgcccgcgcg
tacgaagacccgttcaccgcgggtctgaacccccagcagaaggaagccgtcgagtaccgc
ggcgagtccctgctgatcgtcgccggtgccggttccggcaagacgagcgtgctcacccgc
cgtatcgcgctgctgctcgccaaccgcgaggcctggccgtcgcagatcctggcgatcacg
ttcacgaacaaggccgccgccgagatgcgcgagcgggtgcgtgccctggtcggcggcgag
gccgagggcatgtggatctcgacgttccactccgcgtgcgtgcggatcctccggcgcgag
gccgagcggttcgggttcccgcagtcgttcaccatctacgactccgccgactccaaggcg
ctgctcaagcggatcgtcaaggagctcgaggccgactccctcgggctgacggtcggcgcc
gcggcgtcgaagatctccaagctcaagaacgagctgcaggacatcgacacctacgcgcgg
aacatcaacgtgaacgacccgcaagaggtcatgttcaccgaggtgttccggcggtacacg
aacgagctgcgccgggcgaacgcgttcgacttcgacgacctcatcggacagacggtcttc
ctgttccgggccttccccgacgtcgccgccctgtaccagcggcgcttccgcttcatcctg
gtcgacgagtaccaggacacgaaccacgcccagtacgccctgatccgtgagctcacccgc
gcggtcccggtcgaccaggtcgacaagctcgaggactccggccagcacgtcgcccggatg
cgcgaggccgacggttccatcgcgccggcgtccctgaccgtggtcggcgactcggaccag
tcgatctacgcgttccgcggggccgacatccgcaacatcgtcgagttcgagcgggacttc
ccgaactccaaggtgatcctgctcgaacagaactaccgctcgacgcagaacatcctcgac
gccgcgaacgccgtcatcgcgaacaacttcgaccgtcaggcgaagaacctgttcaccgac
gtcggcgccggcgagaagatcgtcgggttcaccgggtacaccggccacgacgaagcccag
ttcgtcgccgacgagatccagcgtctgcgcgaggacggcacggactaccgcgacatggcg
gtgttctaccggacgaactcgcagacccgcgcgctggaggagatcttcatccgcgccgcg
atcccgtaccgcgtgctcggcggcaccaagttctacgagcgtgccgagatcaaggacgcc
atggcgtacctgatcacggtcgcgaacccggccgacccgatggcgctccgccgcatcctc
aacgtgccgaagcggggcatcggcgccgtcaccgagaccactctgcagcgctacgccgac
gagcacgagacgacgatgcgtgacgccctgcggcacgccggagagctcgggttcgggccg
aaggtgcggaacgccatcaccgagttcgccggtttgctcgactccgtgtccgagaaggca
ccgacccagccggtggtggacaccctgacgcagctgctcgacggctccggcctgctcgag
aacctgcggaagtcgcccgacgcgcaggacgccgcccgggccgacaacatcgacgaactc
gtcgccgtcacgcgggagttccagaaaaacaaccccgagggcaccctgtcggacttcctg
accgaggtctcgctggtcgcggcggcggacgagctcgacgactcgtcgggcacggtgtcg
ctcatgaccctgcacaccgcgaaggggctggagtacgacgcggtgttcctgaccggcgtc
gaggaagacctgctgccgcaccggatgagcgccaacgagccgggtggcccctcggaggag
cgccggctgttctacgtcggcatcacccgtgccaagaagtccctgttcctgtcgctggcg
atgacccgcgcgcagttcggcgacgtcaacgtcgcgatgccgtcgcggttcctgcaggag
atccccgagggcctgatcgagtggaagcagtcgccgggcatggcgaacagccgcggcggc
acgcaaccccgtgcactcaacgcgaagcgcgagggcggcttcggcggcggtggcggtggc
ggcgggtaccgcggcggcggaggctggggcggcggctcgtacgaccgtgcggcggcggcg
tcgaagacccgcccgaagaccgagtgggcgaaccgggtgtccgggcaggtccgcgacaac
ggggacatggagctcgcagccggcgaccgcatcaagcacgtcgacttcggcgagggcacg
gtgtccgcggtcacggggcagggtgccaagcgcatcgccgagatcgccttcgactcggcg
ggccgcaagaagctgctcatcaagatcgcgccgatcgagaagctctag
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