Corynebacterium ulcerans 05146: Cul05146_0639
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Entry
Cul05146_0639 CDS
T03420
Symbol
uvrD3
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cuz
Corynebacterium ulcerans 05146
Pathway
cuz03420
Nucleotide excision repair
cuz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cuz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cul05146_0639 (uvrD3)
03430 Mismatch repair
Cul05146_0639 (uvrD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cuz03400
]
Cul05146_0639 (uvrD3)
Enzymes [BR:
cuz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cul05146_0639 (uvrD3)
DNA repair and recombination proteins [BR:
cuz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul05146_0639 (uvrD3)
MMR (mismatch excision repair)
Other MMR factors
Cul05146_0639 (uvrD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
AAA_12
ADDB_N
DUF5678
Rng_hyd_C
AAA_11
DZR
Motif
Other DBs
NCBI-ProteinID:
AIU91224
LinkDB
All DBs
Position
638035..640086
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AA seq
683 aa
AA seq
DB search
MIDLNDLDSDQRAAASAPRGPVAILAGAGTGKTRTITYRIANLIDRGMASPNRVLAVTFT
RRAAGEMRHRLGVMGVGGVQAQTFHSAAMRQLSYFWPQVAGNLPWKLLDNKFPLVGKAAR
SVGIETTTENVRDLLGEIEWAKATLITPDRYVAHVKDRKIPAAADKIAEVYRRYEQAKTT
SEGMLLDFDDLLLHTAGAIENSTAIAEEFREQYRTFVVDEYQDVTPLQQRVLDAWLGERD
DITVVGDANQTIYSFTGATPNYLLGFSRKYPHATVVKLQRDYRSTPQVTDLANTVIGKAR
GRVAGTRLTLEGMRPPGPEPEFCTFDDEPAEARAVASRIKELLNKGVAASEIAVLYRINA
QSAAFEQALADAGIVYQVRGGGEFFQRAEIRQAMSQLVRVAQRAGTESIRGSALETLVRS
ALAPLGLTPEEPEGTQARERWQSLEALAELTVELTRATPDLDIQGLLEQLNQRASAKHPP
TMQGVTLASLHAAKGLEWDAVFLVGLVDGTLPITHAIKGGDSHIEEERRLFYVGVTRARE
YLVCSWAKARQEGGRATRKRSRFFDGIVEEPIDIAVPPRSKRSKRCRVCGASLGSPSEIV
MRRCADCPSGVDEEVFETLKAWRLDMAKEGGVPAYIVFTDATLHAIAEASPTTTDDLLQI
SGIGQMKVEKYGSSLLETLAQFR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgattgatctcaatgatctggatagcgaccaaagggctgccgctagtgctcctcgcggg
ccggtagccattcttgcgggtgctggaacgggtaagactcgaacgattacctatcggatt
gccaaccttattgatcgtggcatggctagtcctaatcgcgtactggcggtgacgtttaca
cgtcgtgctgcgggggaaatgcggcaccggctgggtgtcatgggcgtaggaggcgtacag
gcgcagacgttccactcagctgcgatgcgccagttgtcgtatttttggccgcaagtggcc
gggaatctgccgtggaaattgttggataacaagtttccgcttgtgggcaaggctgcgcgc
tcggtgggcatagaaacgacgacggaaaacgtgagagatcttctaggcgagatcgagtgg
gcaaaggctacgttgataacgcctgaccgttatgtggcgcacgtgaaggaccgtaagatt
cccgcagccgcagataaaatcgccgaggtataccgcagatatgagcaggctaaaacaaca
agtgagggcatgcttctagacttcgatgacctgttattacacacggcgggagccattgaa
aattcgactgcaattgcagaggaatttcgggagcagtaccgcacgtttgtcgttgacgaa
tatcaggacgttacgccgttgcagcaacgagtgcttgacgcatggctgggggagcgcgat
gacatcaccgtggtgggagacgctaatcagaccatttactcttttacgggagcgactcct
aattatcttttgggattttcgcgtaagtatcctcacgcaacggtggtcaagttacagcga
gattataggtcgactcctcaagtaacagaccttgccaatacggtgatcgggaaagcacgg
ggccgggtggcgggcactcgattgacgttggaaggaatgcgcccgcctggcccagaacca
gaattttgcactttcgacgatgaacctgctgaggcacgcgccgtagcgagcagaattaaa
gaactcctgaacaagggagtagcagcgtcggaaatcgcggtgctttatcgaattaacgcg
cagtcggcggcttttgaacaggccctcgcggatgccgggattgtctaccaggtgcgcggt
ggcggtgagttcttccagcgcgcggagattcgtcaagccatgtctcagctggtgcgcgtc
gcacagcgtgcaggaacagagtcaattcgcggttccgccctggagaccttggtgcgctcg
gcgttagcgcctctgggattaaccccggaagaaccggaaggcacgcaggcgcgtgaacga
tggcagtctctagaggccctcgctgagctcacagtagagttgactcgcgctacaccggat
ctggatatccaggggcttctagaacaactcaatcagcgggcaagcgccaaacaccctccg
acgatgcaaggagtgacattagcttctttacatgcagctaaaggcctggagtgggatgcg
gtgtttcttgtagggcttgtcgacggcaccctcccaatcacccacgctattaagggggga
gactcgcacattgaagaggagcgcaggcttttctatgtcggcgttactcgtgccagggag
taccttgtgtgctcgtgggcaaaagctcgtcaggagggcggacgcgcgacacggaagaga
agccggttctttgacggcattgtggaagagcctatcgatatcgccgtcccaccacgcagt
aagcgttcaaagcgctgtcgtgtgtgcggcgcatccctgggctccccctcagaaatcgtg
atgagaagatgcgccgattgcccgtcgggcgttgatgaggaggtgttcgagactctgaag
gcgtggcgtctagacatggctaaagaaggcggtgtgcctgcttacatagtcttcacagac
gcaaccctgcacgctattgctgaggccagcccaacgaccacagatgacctactacagatt
tccggtatcggtcagatgaaagtagaaaagtacggcagtagcttgctggaaactttggct
caattccgctga
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