Corynebacterium ulcerans 05146: Cul05146_0951
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Entry
Cul05146_0951 CDS
T03420
Symbol
rho
Name
(GenBank) Transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
cuz
Corynebacterium ulcerans 05146
Pathway
cuz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cuz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cul05146_0951 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cuz03021
]
Cul05146_0951 (rho)
03019 Messenger RNA biogenesis [BR:
cuz03019
]
Cul05146_0951 (rho)
Transcription machinery [BR:
cuz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Cul05146_0951 (rho)
Messenger RNA biogenesis [BR:
cuz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Cul05146_0951 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIU91528
LinkDB
All DBs
Position
963526..965925
Genome browser
AA seq
799 aa
AA seq
DB search
MLSSRFRSSPPNCCQGRAGGAMFPRMCAFLTHSVGILGHLRHQYLNPVNSTACFPVVVTW
LNIFPVASFSSGKGDERTSVTTTDNGAQRNLAALRLPELRKIAAEMGLKGTSALRKGDLI
AAISGAQGGKAAQGGRSTASAAKHTAQTKSTPKVEKDSAPVENSAAEASKAQQEKADQAP
AKEPKTRRRRVLKTTGTTEAAKDVVSNESIAQASAPVEEEKPRRRRATRRVETPSEKHGS
ADSSSQDKADVSADVNDGAAGAVEHGDADDENRYESRSAARRARRNRARREHREDRQVSQ
REDNRSENDQNSHDGERRKDAPVDSVKAEERREASEHQAADQQQVRESRESSDNEHPRQR
NGRHHERGERGDRGDRNDRNRRNRRNRRGRDRDDNRDNTNIEPREDEVLQNIAGILDIVD
SNVAFVRTSGYHAGPADVYVNNQMIRRLGLRAGDAIVGQVRMNGDNSHGGHHGHNRGRNR
QKYNPLVRVESVNGMSIEEAKARPDFSKLTPLYPNQRLRLETEPKILTTRVIDLIMPIGK
GQRALIVSPPKAGKTTILQNIANAIATNNPECYLMVVLVDERPEEVTDMQRSVKGEVIAS
TFDRPPSEHTAVAELAIERAKRLVEQGQDVVVLLDSITRLGRAYNNSSPASGRILSGGVD
SNALYPPKRFLGAARNIENGGSLTIIATAMVETGSAGDTVIFEEFKGTGNAELKLDRKIS
ERRVFPAVDVNPSGTRKDELLLVPEEARIMHKLRRILAALDNQQAIDLLIKQLKKTKSNG
EFLMQIASSAPMAADAEEE
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
gtgctcagttcccgctttagaagttcaccaccgaattgctgccaaggccgcgccggcggg
gcaatgtttcctcgtatgtgtgcgttcttaacgcattcggtagggattctcgggcatcta
cgccatcagtacctgaatccagttaattccacagcatgctttccagtggtggtcacttgg
ttgaacattttcccggtggcttctttttcctctggtaaaggcgatgaaaggacatctgtg
acaacaacagataacggcgcacagcgtaatcttgctgcattgcgtctgcccgagctgcgt
aagatcgccgctgaaatgggtctaaaaggcacctctgcactacgcaaaggtgatctcatt
gccgcgattagcggcgcgcaggggggaaaggctgcacaaggcggacgtagtaccgcatct
gcagcaaagcacacggcacaaacaaaatctacgccaaaggtggagaaggattctgcacct
gtagaaaactcagctgcagaggcgtctaaggcccaacaagaaaaggctgatcaggctcca
gctaaagaaccaaagacacgtcgtcgtcgagtgctgaagacaacgggaaccaccgaggcg
gcaaaagacgtggtttccaatgagtccattgcacaggcgtctgcgcccgtggaagaagaa
aagccgcgccgtcgtcgcgcgactcgtcgtgtagaaactccttcagagaagcatggctct
gcagacagctcctcacaggacaaagcggatgtgtccgctgacgtgaatgatggggcagcg
ggagccgtggaacatggcgatgctgatgatgaaaaccgctacgaatcgcgctcagctgct
cgacgcgctcgtcgtaaccgcgctcggcgggagcaccgcgaggaccggcaggtttctcag
cgagaagataatcgctctgagaatgatcagaactcccacgatggggaacgtcgtaaagac
gcacccgttgatagcgtgaaagcagaggaacgtcgggaagcttctgagcatcaggctgca
gatcagcagcaggttcgggaatcccgtgagagctctgacaacgagcatcctcgtcagcgc
aatggtcgccatcatgagcggggcgagcgcggtgaccgaggtgatcgtaatgatcgcaat
cgtcggaatcgccgtaaccgacgcggtcgtgatcgtgacgataaccgagataacaccaac
attgagcctcgtgaagacgaagttttgcagaacatcgccggcatcctcgacatcgtggat
agcaatgtcgcttttgttcgcacgtcgggttaccatgctggccctgcagacgtctacgtg
aataaccagatgattcgtcgcttgggcctacgtgccggcgatgccatcgttggccaggtt
cggatgaatggcgataatagccatggtggacatcatgggcacaaccgtggacgcaaccgt
caaaagtacaacccgttggttcgcgttgaatctgtcaacggcatgtccatagaggaagct
aaggcacgtccggacttctctaagctcacgccgctgtacccgaaccagcgactgcgtttg
gaaaccgaaccaaagatccttaccactcgtgtgatcgacttgatcatgcctattggtaaa
ggtcagcgtgcgcttatcgtgtctccgccgaaagctggtaagactacgattttgcagaac
atcgctaacgccatcgccacaaataaccctgagtgctacttgatggtggtgcttgtcgac
gagcgtcccgaggaagtcaccgacatgcagcgctccgtcaagggcgaggttattgcctcc
accttcgatcgtccgccaagcgagcataccgctgtagctgagttggcaatcgagcgtgct
aagcgactcgtagagcaaggacaagatgtcgtggtgctcctcgattccatcacgcgcctt
ggccgtgcttacaacaactcttctcctgcttccggccgtatcctgtccggtggtgtggac
tcgaatgccctctacccaccaaagcgtttcctaggcgcagctcgtaacatcgaaaatggt
ggctctttgaccatcatcgctactgcgatggtagaaactgggtctgcaggcgacaccgtg
atctttgaggaattcaagggaaccggtaacgcagagctcaagctggatcgcaagatctcg
gagcgccgcgtattcccagcagtggatgttaatccgtcaggaactcgtaaagatgagctt
cttctggttcctgaggaagcccgcatcatgcacaaactgcgcaggattcttgcagccttg
gataatcagcaggccatcgatctgctgatcaagcagctcaagaagactaagtccaacggt
gagttcttgatgcagattgcatcgagtgccccgatggctgcagacgctgaggaggagtaa
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