Corynebacterium ulcerans 05146: Cul05146_1340
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Entry
Cul05146_1340 CDS
T03420
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cuz
Corynebacterium ulcerans 05146
Brite
KEGG Orthology (KO) [BR:
cuz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cuz03016
]
Cul05146_1340
Enzymes [BR:
cuz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Cul05146_1340
Transfer RNA biogenesis [BR:
cuz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Cul05146_1340
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AIU91902
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All DBs
Position
1395500..1396705
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AA seq
401 aa
AA seq
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MPELLDEPREGLPPLCTTVEEIADAARLLESGTGPFAVDTERASGFRYDDRAFLLQIRRR
QAGTVLIDPSIHPEAVTQHLGRVLNFHTWVIHAAPSDLPCLHELGLRPSNIFDTELAGRL
IGMPRVNLAAMTEEIVGFTLLKGHGAEDWSTRPLPTDWLNYAALDVETLLDLADAMAELL
DSQGKLDWAEQEFAHLVHMEYDTPRSPKQWIDLKGIGSIKDPEQLVVAREVWNAREKEAY
EVDKAVSRILPDKAVIGLALSMPQSVRAVERSPGYPSRLRKASRRWLSVVTAARKLPSSQ
WPQRNPRPPRPYPPKSLWGRDYPEVLAAWEDVQRSLSSLSLHLEIPVENILQPSALREIV
WLCCTTHSIVSHDDLVQALRDHQAREWQIQIVLDPLRRKLL
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagcttctcgacgaacccagggagggccttcctccactgtgcactacggtagaa
gaaatagctgatgcagcgcgtcttctcgaatctggaactggaccgtttgctgtagataca
gaacgtgcctcaggattccgttatgacgatcgtgcttttcttctacaaatccgtagaagg
caagccggcacggtgcttatcgacccttcaatccatcccgaggctgtcactcagcacctc
ggaagagtgctcaacttccatacttgggtcattcacgcggcccccagtgatctaccgtgc
ctgcacgaattgggactgcgtccttctaatatttttgataccgaacttgccggcaggctc
atcggtatgccgcgcgtcaaccttgccgcaatgaccgaagaaatcgtcggcttcacattg
ctcaaaggacatggcgcagaggattggtccacgcgtccccttcctacagactggctaaac
tatgcagctctagacgtagaaactctcttagaccttgctgatgcaatggcggagctactc
gattctcaaggcaagctcgactgggctgaacaagagtttgcccaccttgtccacatggaa
tatgacactccgcgctcgcctaaacagtggatagatcttaaaggaattggttccatcaaa
gatcccgagcaacttgtcgtggccagagaagtctggaatgcacgagagaaggaagcctac
gaagtggacaaggcagtgtctcgtatactgcctgataaagcagtcatcggtttagcactt
tccatgcctcagagtgtacgtgcagtagaacgatcacccggttatccttcccggttacga
aaggcatctcgtaggtggttgagcgttgtcacggctgcccgcaagcttccctctagtcaa
tggccgcaaaggaatcctcgcccaccgcgtccttatcctcccaaatctttgtggggacgc
gactatcctgaggtcttggcggcctgggaggacgtacagcgctcgttaagctccctgtct
ctccacctggagattcccgtcgagaatattcttcagccctcagctctccgagaaatcgtc
tggctgtgctgtaccacacactcgattgtctcccatgacgaccttgtacaggctttacgc
gatcaccaggcgcgcgagtggcaaattcagattgtcctcgacccgctgcgccgcaagctc
ctataa
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