Corynebacterium variabile: CVAR_0005
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Entry
CVAR_0005 CDS
T01594
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cva
Corynebacterium variabile
Brite
KEGG Orthology (KO) [BR:
cva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cva03032
]
CVAR_0005 (gyrB)
03400 DNA repair and recombination proteins [BR:
cva03400
]
CVAR_0005 (gyrB)
Enzymes [BR:
cva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CVAR_0005 (gyrB)
DNA replication proteins [BR:
cva03032
]
Prokaryotic type
DNA Topoisomerases
CVAR_0005 (gyrB)
DNA repair and recombination proteins [BR:
cva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CVAR_0005 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Toprim_4
Peptidase_M9_N
Motif
Other DBs
NCBI-ProteinID:
AEK35351
UniProt:
G0H9N9
LinkDB
All DBs
Position
5492..7552
Genome browser
AA seq
686 aa
AA seq
DB search
MAEAEMNAGPESHHGSGDYGADQITILEGLEAVRKRPGMYIGSTSERGLHHLIWEVVDNS
VDEAMAGFADHVEVTLKDDGSVQVSDNGRGIPVEMHPTGRPTVQVVMTELHAGGKFDSQA
YAVSGGLHGVGISVVNALSTRVETEIRRDGYLWHQVFDHSIPEELEQVKKARGSGTTQRF
WADPEIFETTTYNFDTVSRRLQEMAFLNKGLTITLTDERRQVIEQVEDLEDAAADEAAAP
KTADEEAEEQKKDAPKVRTKVFHYPDGLKDYVDHLNKSKTPVHPTVIDLEVKGDDHEVEI
ALQWNSGYSQSVHTFANTINTVEGGTHEEGFRAALTSLMNRYARDHKMLKDKEPNLTGDD
CREGLAAVISVRVGDPQFEGQTKTKLGNSEIKGFVQKATNEHVADWFDANPAEAKAIVNK
AVSSAQARVAARKARDLVRRKSATDLGGLPGKLADCRSKDPVKSEIYIVEGDSAGGSAKS
GRDSMFQAILPLRGKILNVEKARLDKVLKNAEVQAIITALGTGIHDEFDINKLRYHKIVL
MADADVDGQHIATLLLTLLYRFMRPLIEEGHVYLAMPPLYKLKWGKGEPGFAFSDAERDA
QLAEGLAAGRKINKDDGIQRYKGLGEMNAKELWETTMDPQDRILKKVTLEDAADADETFA
VLMGDDVVARRSFITRNAKDVRFLDV
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaggctgagatgaacgctggaccggaatcccaccacgggtccggggattacggt
gcagaccagatcaccatcctggaaggcctcgaggcagtccggaagcgcccgggcatgtac
atcggctccaccagtgagcgcggtctccaccacctcatctgggaggtcgtggacaactcc
gtcgatgaggcgatggccggtttcgccgaccatgtcgaggtgaccctcaaggacgacggt
tccgtccaggtctccgacaacggccgtggcatcccggtggagatgcacccgacggggcgt
ccgaccgtccaggtcgtcatgaccgagctgcacgccggcggtaagttcgactcccaggcc
tacgcggtctccggtggtctgcacggtgtcggtatctccgtggtcaacgccctgtcgacc
cgcgtcgagaccgagatcaggcgtgacggctacctctggcaccaggtcttcgaccactcc
atccccgaggaactggagcaggtcaagaaggcccgcggatccggcaccacccagcggttc
tgggcggaccccgagatcttcgagaccacgacctacaacttcgacacggtctcccgccgc
ctccaggagatggccttcctcaacaagggcctgaccatcacgctcaccgatgagcgtagg
caggtcatcgagcaggtcgaggacctggaggacgccgccgccgacgaggctgccgccccg
aagaccgcggacgaagaggccgaggagcagaagaaggacgcaccgaaggtacgcaccaag
gtcttccactacccggacggcctgaaggactacgttgaccacctcaacaagtcgaagacc
ccggttcaccccaccgtcatcgacctggaggtcaagggtgacgaccacgaggtcgagatc
gccctgcagtggaactccggttactcgcagtcggtccacaccttcgccaacaccatcaac
acggtcgagggcggtactcacgaggagggtttccgcgctgcgctgacctccctgatgaac
cgctacgcccgcgaccacaagatgctcaaggacaaggagccgaacctcaccggtgacgac
tgccgtgagggcctcgccgcggtgatctccgtgcgtgtcggtgacccgcagttcgagggc
cagacgaagaccaagctcggtaactccgagatcaagggcttcgtccagaaggccaccaac
gagcacgtcgccgactggttcgacgccaacccggccgaggcgaaggcgatcgtcaacaag
gccgtctcctctgcccaggcccgcgtcgccgcccgtaaggcccgtgacctggtgcgacgc
aagtccgccacggatctcggcggcctgcccggcaagctcgccgactgccgttccaaggat
ccggtgaagtccgagatctacatcgtggagggcgactcggccggcggttccgccaagtcc
gggcgtgactcgatgttccaggcgatcctcccgctgcgcggcaagatcctcaacgtggag
aaggcccgcctcgacaaggtcctgaagaacgccgaggtccaggcgatcatcaccgccctg
ggtaccggtatccacgacgagttcgacatcaacaagctccgctaccacaagatcgtcctc
atggcggacgccgacgtcgacggccagcacatcgcgaccctgctgctgaccctgctctac
cgcttcatgcgtccgctcatcgaggagggccacgtctacctcgcgatgccgccgctgtac
aagctcaagtggggcaagggcgagccgggcttcgccttctccgacgccgagcgtgacgcg
cagctggccgagggcctcgccgccggccggaagatcaacaaggacgacggcatccagcgc
tacaagggcctcggcgagatgaatgccaaggagctgtgggagaccaccatggacccgcag
gaccgcatcctcaagaaggtcaccctggaggacgccgcggacgccgacgagaccttcgcc
gtcctcatgggcgacgatgtggtcgcccgccgcagcttcatcacccgcaacgccaaggac
gtccggttcctcgatgtctga
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