Corynebacterium variabile: CVAR_0106
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Entry
CVAR_0106 CDS
T01594
Name
(GenBank) putative membrane protein
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cva
Corynebacterium variabile
Pathway
cva02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cva00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CVAR_0106
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cva02000
]
CVAR_0106
Transporters [BR:
cva02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CVAR_0106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_30
AAA_22
SMC_N
AAA_23
TsaE
AAA
RsgA_GTPase
AAA_28
AAA_33
AAA_16
DO-GTPase2
MMR_HSR1
AAA_19
AAA_29
NB-ARC
ATP-synt_ab
NTPase_1
DUF87
Zeta_toxin
AAA_25
cobW
AAA_5
NACHT
ATP_bind_1
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AEK35453
UniProt:
G0HAM7
LinkDB
All DBs
Position
129848..131719
Genome browser
AA seq
623 aa
AA seq
DB search
MQQPQKIRSFWSATKRMLGLLGARKAAMAWVFFLLTVCVVLSVWAPKVLGYAVDVIYDGV
RAMWSGEPGAGIDYGRLGELIGIVLGMYVVAGVFNWLQGFVLNRVVVAVVIELRARVERK
IHHLPLNYYDTRQRGDILSRTTNDVDNIQQALQQAISQLVYSVMMIIGVLVMMFTVSWQL
TLLSLLVLPLTAVIVGVIGGRAQKEYGSQWRETGRVNGHVEESFTGHDLVVAYGRQEEMA
EEFTRRNESMYRASAKAQFLSGSMMPLMQFLTWLSYVVIAVAGGLRVAGGSMTLGAATAF
ITYSREFNQPLSEVAGMMTMLQSGLASTERVFELLDAGEEDADPADPVTPELATGQKPGR
VEFRDVSFGYGGAATEPLITDLDLTVEPGQTIAIVGPTGAGKTTLVNLIMRFYEVTGGSI
RLDGVDTRAMTRADLRSRTGMVLQDAVLFEGTIMENIRYGRLEATDPEVIDAAKAAYVDR
FVHALPEGYDTVIDQDGGSVSAGERQLITIARAFLRAPELLILDEATSSVDTRTEVLVQK
AMNAIRADRTSFVIAHRLSTIRDADRILVMVEGAIVEQGSHEELLELDGAYADLYRSQFA
AGGAGDDVDIVDPADAAGTGGAE
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagccccagaagatccggtcgttctggtcggcgacgaagcgcatgctcggtctg
ctgggcgcacgcaaggccgcgatggcgtgggtgttcttcctgctcaccgtgtgtgtggtc
ctgtcggtgtgggcgccgaaggtgctcggctacgccgtggacgtcatctacgacggtgtc
agggcgatgtggagcggcgagcccggtgccgggatcgactacggtcggctcggtgagctc
atcggcatcgtgctgggcatgtacgtcgtggccggggtgttcaactggctgcaggggttc
gtgctcaaccgggtggtcgtggcggtcgtcatcgagctgcgcgcgcgggtggagcgcaag
atccaccacctgccgctgaactactacgacacccgccagcgtggcgacatcctctcgcgc
accaccaatgacgtcgacaacatccagcaggcgctccagcaggcgatcagccagctggtg
tactcggtgatgatgatcatcggtgtgctggtcatgatgttcaccgtgtcctggcagctc
acgttgctgtcgctgctcgtgctgccactgaccgccgtgatcgtcggcgtgatcggtggt
cgggcgcagaaggagtacggctcccagtggcgtgagaccggtcgggtcaacggtcatgtc
gaggagtccttcaccgggcacgacctcgtcgtcgcctacggtcggcaggaggagatggcc
gaggaattcacccgccgcaatgagtcgatgtaccgggcgagcgcgaaggcgcagttcctg
tccgggtcgatgatgccgctgatgcagttcctcacctggttgtcctacgtggtcatcgcg
gtggccggcgggctgagggtcgccggcgggtcgatgaccctgggtgcggcgacggcgttc
atcacctactcgcgcgagttcaaccagccgctgtcggaggtcgccgggatgatgacgatg
ctgcagtccgggctcgcctccaccgagcgtgtcttcgagctgctcgacgccggcgaggag
gacgccgacccggctgatccggtaacgccggagctcgccaccggtcagaagccgggccgg
gtggagttccgggacgtctccttcggctacggcggggcggccaccgagcccctgatcacg
gacctggacctcaccgtggagccggggcagacgatcgcgatcgtcggtccgaccggtgcc
ggtaagacgacactggtgaacctcatcatgcggttctacgaggtcaccggtggttccatc
cggctcgacggtgtggatacccgcgccatgacccgcgctgacctgcgctcgcgcaccggc
atggtgctgcaggacgcggtgctgttcgagggcacgatcatggagaacatccgctacggc
cggctggaggccacggacccggaagtgatcgacgcggcgaaggcggcctatgtcgaccgg
ttcgtccatgcgctgccggagggctatgacacggtcatcgaccaggacggtggctcggtc
tctgccggagagcggcagctgatcaccattgcccgcgccttcctgcgtgcccctgagctg
ctgatcctcgatgaggcgacatcgtcggtggacacccgcaccgaggttctggtgcagaag
gcgatgaacgcgatccgggcggaccggacctcattcgtcatcgcgcaccggctgtccacg
atccgggacgccgaccggatcctcgtgatggtcgagggtgcgatcgtggagcagggttcc
catgaggagctgctggaactcgacggcgcctatgcggacctgtaccgcagccagttcgcc
gccggtggtgccggggatgacgtggacattgtcgacccggctgacgcggccggtacaggg
ggcgcggagtag
DBGET
integrated database retrieval system
