Corynebacterium variabile: CVAR_0510
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Entry
CVAR_0510 CDS
T01594
Name
(GenBank) DNA repair protein
KO
K04485
DNA repair protein RadA/Sms
Organism
cva
Corynebacterium variabile
Brite
KEGG Orthology (KO) [BR:
cva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cva03400
]
CVAR_0510
DNA repair and recombination proteins [BR:
cva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CVAR_0510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
DUF7125
Zn_ribbon_LapB
DnaB_C
AAA_16
AAA_22
AAA_30
AAA
DUF7129
ChlI
NACHT
nSTAND_NTPase5
NTPase_1
nSTAND3
KdpD
AAA_29
AAA_5
ABC_tran
ATPase_2
AAA_14
AAA_19
Lon_C
AAA_18
AAA_24
SLFN-g3_helicase
RsgA_GTPase
Zn_ribbon_3
NPHP3_N
MMR_HSR1
RecA_N
Zeta_toxin
KTI12
DAP3
Elong_Iki1
IstB_IS21
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AEK35859
UniProt:
G0HC04
LinkDB
All DBs
Position
complement(591100..592554)
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AA seq
484 aa
AA seq
DB search
MAKKSPGYECSSCGHRVSKWVGKCQSCGEWGTVEELSPAAVAVTSGASGRSGKSSAVSLS
GLTPTSPARKVTDIDPSGAVHRPSGIGELDRVLGGGVVPGSAVLLAGEPGVGKSTLLLEV
ANRWARQDRSVLYITAEESVGQVRQRAGRTDALSANLWLAAEHDLETALGQIEVTRPELV
IVDSLQTLHATGVEGVAGGVAQTRAVAATLTTFAKTTGIPVLLVGHVTKDGAVAGPRTVE
HLVDVVLQFEGDRHSALRFLRGQKNRFGATDEVGCFEQTSDGIREVPDPSGLFLNQRDEP
VSGTAVTVIMDGRRAMPGEIQTLAMETEMSNPRRVVTGIDTGRVATILAVLARRAGIDLM
GHEVYAATVGGMKISEPAADLATALALASTRHDKVLPDGLVAVGELGLGGEVRRVPDLRL
RLSEAARLGFTSAIVPASTRDADRVRVKGLRIIPVRTLGEALDQLGLAKEARRKYPERRK
KDRD
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaagtcccccggctacgaatgctcctcctgcggccaccgtgtgtccaagtgg
gtgggcaagtgtcagtcctgcggtgagtggggcaccgtggaagaactctcccccgccgcc
gtggcggtgacttccggggcgtcaggcaggtcggggaagagcagtgctgtctccctgtcc
ggtctgaccccgacctcgccggccaggaaggtcaccgacatcgacccctccggtgcggtg
caccggcccagcggcatcggcgagctcgaccgtgtcctcggtggtggtgtggtgcccggc
agtgcggtcctgctcgccggtgagcccggcgtcggcaagtccacgctcctgctggaggtc
gcgaaccggtgggccaggcaggaccgcagcgtcctctacatcaccgccgaggagtcggtc
gggcaggtccgccagcgcgccggacgcaccgacgcactgtccgcgaacctctggctcgcc
gcagagcacgacctggagaccgcgctggggcagatcgaggtgacccgcccggagctcgtc
atcgtcgattccctgcagaccctgcacgccaccggtgtggagggagtcgccggcggtgtg
gcgcagacccgggcggtcgccgccacgctcacgaccttcgccaagaccacggggatcccg
gtgctgctcgtcggccacgtgaccaaggacggggcggtcgccggcccccgcaccgtcgag
cacctggtggatgtggtcctccagttcgagggtgaccggcacagtgcgctgcgtttcctc
cggggacagaagaaccggttcggcgccaccgacgaggtcgggtgtttcgagcagacctcc
gacgggatccgggaggtccccgacccctccggtctcttcctcaaccagcgggacgagccg
gtctccgggacagcggtcaccgtgatcatggacggacgccgtgccatgcccggggagatc
cagacactcgccatggagacggagatgagcaacccgcggcgtgtggtcaccggtatcgac
acgggtcgcgtcgccaccattctcgcggtcctcgcgcgccgcgcgggcatcgacctgatg
ggtcatgaggtctatgcggcgaccgtcggcggcatgaagatcagtgaacctgcggcggac
ctggcgaccgcactggcgctggcatccacccggcatgacaaggtgctgccggacggcctg
gtcgcggtcggcgagctcggactgggtggcgaggtccggcgtgtcccggatctgcggctg
cgattgtccgaggctgcccggctggggttcacctcggcgatcgtcccggcgtccaccagg
gacgctgaccgcgtgcgggtgaagggactccgcatcatcccggtgaggacgctgggagag
gcgctggaccagctcggcctggcgaaggaggcccggcggaagtacccggagcggcggaag
aaggacagggactga
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