Corynebacterium variabile: CVAR_0615
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Entry
CVAR_0615 CDS
T01594
Symbol
traA
Name
(GenBank) conjugal transfer protein
Organism
cva
Corynebacterium variabile
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
TrwC
AAA_19
Viral_helicase1
Helicase_RecD
Prolactin_RP
PhoH
Motif
Other DBs
NCBI-ProteinID:
AEK35967
UniProt:
G0HD03
LinkDB
All DBs
Position
complement(721297..724563)
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AA seq
1088 aa
AA seq
DB search
MDWINPVTGESMGIPRKPGEGSKGSPLFAEMTINAPKSLSVAAALHPEVSDALDAAQQDA
LAEIRRWLGRHSVTRVGPRDAREVVPIEQMQVVGISHKTSRAGDPHRHIHMQIGTRIFAA
GKWRALDTAALFKQQGAIRALGTAVIAAHPGLAQTLADHGLTLDPVIGEVVELQPFNQVM
SKRSAQINRNLDRLEAEWEAAHPGEEPGPVMTARMQGIAWAHQRPGKKPADLKNEQWWRQ
ELCEAGYDLAVLERKPVQPPASLDDLAVQEVASRALDRCAAGASAWTPHTVAEHVTRITT
EAGVRATPQELREFIAVATDLATGDCLSILPPGAPTPEHVAHLTSLGVVAAETELRDQLT
AATPRGEPKPADVTEAARTAGLDEGQTVAAAAVASRDPLVIVEGAAGAGKTTMLGVAIGV
AAEHGRPSRVVAPTLRAAQVAHDELGVPATSVAALVYAHGWRWNADGVWTRLAAGDTDPE
TGRIYTGPPREAVLRRGERVIVDEAGMLDQDTARALITVTAEAKVTVALVGDRAQLPAVG
RGGVLDMAAQIRGRTYDMSELHRFTDPEYAALTLTMRDRENPGDVFDQLAAMGLIHLHAD
DDAARDHITEHTRDGEAITVATNDEAAALNERIRNGRVEAGEVDDAVTATGSDGLTIGAG
DLIQTRKNDTTLGVANRQQWIVQQVAENGTVYARETASGRRNPRTVTLPAEYVEEHAHLS
YAATAYGVQGATVNTSHTILSEATTAAGVYVGMTRGRETNRLHVVAEDMADARVQFIDAM
ERDPADRGLDHATRTAQEAVRGLIADGPVRLVTEELARLDREAERAQRAAERWEQIAARF
DAQRATHRAEDDQSVAALRKAEEAAEQTRAEVAGPLTAQAEHDGAAYLSAVENEAAERAR
LATVGRFGRRRARNDHQAATNRTRTLRGQVSSEWGTTPTSTDRLSKWAVKVAAKRAETDP
RVTDAVQAIDAATTDHEAMRKRHEQEHLTLLVDEHGAERVRYDRVGVLMIKPHRKADGAR
TRAALIRAEADELRTLPIAEAAQRIETKNAEREHRRQEAVGRERQLPDPFEYDPHRHDSG
RDGPSRGL
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
gtggactggatcaacccggtcacgggcgagtcgatgggtatcccgcgcaagccgggcgag
gggtcgaaggggtcgccgttgttcgcggagatgacgatcaacgcccccaagagcctgtcg
gtcgccgccgccctccaccccgaggtctctgacgcgttggacgccgcgcagcaggacgcg
ctggcggagattcgccgttggctcggtcggcattccgtgacgagggtggggccgagggat
gcgcgggaggtcgtgcctatcgagcagatgcaggtcgtcggcatctcgcataagacctcg
cgggcgggtgatccgcaccggcacatccacatgcagatcggtacccgcatcttcgctgcc
gggaagtggcgggctctggacaccgccgcgctgttcaaacagcaaggtgcgatccgcgcc
ctcggcaccgccgtgatcgccgcgcaccccggcctcgcgcagacgctcgcagaccacggc
ctgaccctcgaccccgtgatcggcgaggtggtcgagttgcagccattcaaccaggtgatg
tcgaagcggtcagcacagatcaatcgcaacctcgaccgcctcgaagccgaatgggaagcc
gcacaccctggcgaggaacccggccccgtcatgacagcacggatgcagggcatcgcgtgg
gcacaccagcgacccggcaagaagcccgccgacctcaagaacgaacagtggtggcggcaa
gaactttgcgaggccggatatgacctcgcggtcctcgaacgcaagcccgtgcaacccccg
gcatcgctggacgacctcgccgtgcaggaggtcgcgtcgcgggcgctcgaccgttgcgcc
gccggtgcatcggcgtggacgccgcacaccgtggccgagcacgtcacccggatcaccacc
gaggcaggcgtgcgggcgaccccgcaggagttgcgggagttcatcgcagttgcgaccgat
cttgcgaccggtgattgcctctcgatcctgccgccaggagcaccgacgccggagcacgtc
gcccacctgaccagcctcggcgtggtcgccgctgaaaccgagctgcgcgaccaactcacc
gccgcgactccgcgcggggagccgaaacccgctgacgtgaccgaagccgcacgaacagcg
gggctggacgaggggcagacggtcgctgccgctgcggtcgcctcacgtgatccgctggtg
atcgtggagggcgcagccggtgcgggcaagaccacgatgctcggcgtcgccatcggcgtg
gccgccgagcatggcagaccgtcgcgggtggtcgcgccgacattgcgggcggcgcaagtg
gcgcacgatgaactcggcgtacccgccacttccgttgcggcgctggtctacgcgcatggg
tggcggtggaacgcggacggcgtatggacacgcctggccgcaggcgacactgatcccgag
actgggcgcatctacaccgggccgccgcgagaagcggtgttgcggcggggtgagcgggtg
atcgtggacgaggccgggatgctcgaccaagacaccgcccgagccctcatcaccgtgacc
gccgaggcgaaagtgacggtcgcgctcgtcggcgaccgcgcccaactccccgctgtcggc
aggggcggggtgctcgacatggccgcgcagattcgtggccgcacctacgacatgagcgaa
ctgcacaggttcaccgaccccgagtacgccgccctcacgctgacgatgcgcgaccgggag
aaccccggcgacgtgttcgaccaactcgccgcgatggggctgatacatctgcacgcggac
gacgatgcggcccgtgaccacatcaccgagcacacccgtgacggcgaggcgatcaccgtc
gccacgaacgatgaggcggcagcgttgaacgagcgcatccgcaatgggcgcgtcgaggct
ggtgaggttgacgacgcggtgacggcgaccggcagcgacggcctcaccatcggggccggt
gacctcatccagacccgcaagaacgacacgaccctgggcgtggcgaaccggcagcaatgg
atcgtccagcaggtggccgagaacggcactgtctatgcgagagagacggcgagtgggcgc
aggaaccctcgcacggtcacgctccctgccgagtatgtggaagagcacgcgcacctgtcc
tatgccgcgaccgcctacggcgtccagggcgcaaccgtcaacacctcccacacgatcctg
tcggaggcgacgaccgccgcaggcgtctacgtcggtatgactcgtggccgggagacgaat
cggctacacgtcgtcgccgaggacatggcggatgcgcgggtgcagttcatcgacgcgatg
gaacgcgaccccgccgatcgcggcctcgaccacgccacccgcacagcacaagaagccgtg
cgcggcctcatcgcagacggccccgttcggctcgtcaccgaagaactcgccaggctcgac
cgtgaagccgaacgcgcacaacgcgcggcggaacgatgggagcagatcgccgccaggttc
gatgctcaacgcgccacccaccgagccgaagacgaccagagcgtcgccgcgctccgcaag
gccgaggaagccgccgagcagacacgtgccgaggtcgccgggccgctcaccgcccaggcc
gagcacgatggtgccgcctacctcagtgccgtcgagaacgaggccgccgaacgcgctcgt
ctcgccaccgtggggaggttcggcaggcgcagagccaggaacgatcaccaggccgcgacg
aatcgcacgcggacgttgcgcggtcaagtcagcagcgagtggggcacgaccccgaccagc
actgatcgcctctctaaatgggcggtcaaggtcgcggcgaagcgtgctgagacagaccct
cgcgtgaccgatgctgtgcaggccatcgacgccgcaaccaccgaccatgaggcgatgcgg
aagcgtcatgagcaggaacacctgacgttgctggtcgacgagcacggggccgagcgcgtc
cgctacgaccgtgtgggcgtcctgatgatcaagcctcaccgaaaggccgacggcgcccgc
acccgtgccgcgctgatccgcgccgaagccgacgaactacgcaccctcccgatcgccgaa
gccgctcagcggatcgagaccaagaacgccgagcgagagcacagacgacaggaggcagtg
gggcgggaacggcagttgcccgacccgttcgagtacgaccctcaccgccatgactcgggt
cgcgacgggccatcacgcggactctag
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